Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 CYP2T1P-201ENST00000432607 1285 ntBASIC16.2■□□□□ 0.18
CMTM3Q96MX0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 RAP2CP1-201ENST00000605103 478 ntBASIC16.2■□□□□ 0.18
CMTM3Q96MX0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMTM3Q96MX0 FLJ13224-201ENST00000313737 1514 ntBASIC16.19■□□□□ 0.18
CMTM3Q96MX0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.19■□□□□ 0.18
CMTM3Q96MX0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 DUX4L16-201ENST00000555130 1264 ntBASIC16.19■□□□□ 0.18
CMTM3Q96MX0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 AC009053.2-201ENST00000563701 2365 ntBASIC16.19■□□□□ 0.18
CMTM3Q96MX0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CMTM3Q96MX0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 AC141586.5-201ENST00000624546 2050 ntBASIC16.18■□□□□ 0.18
CMTM3Q96MX0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 TUBB8P6-201ENST00000436895 1288 ntBASIC16.18■□□□□ 0.18
CMTM3Q96MX0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.18■□□□□ 0.18
CMTM3Q96MX0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CMTM3Q96MX0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CMTM3Q96MX0 MTMR9LP-203ENST00000426597 1545 ntBASIC16.17■□□□□ 0.18
CMTM3Q96MX0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms