Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
IFT43Q96FT9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.38■□□□□ 0.69
IFT43Q96FT9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IFT43Q96FT9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.38■□□□□ 0.69
IFT43Q96FT9 Z85996.1-201ENST00000494644 937 ntBASIC19.38■□□□□ 0.69
IFT43Q96FT9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IFT43Q96FT9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.38■□□□□ 0.69
IFT43Q96FT9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.38■□□□□ 0.69
IFT43Q96FT9 AP000525.1-201ENST00000608286 694 ntBASIC19.38■□□□□ 0.69
IFT43Q96FT9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 AL049812.1-201ENST00000432563 2267 ntBASIC19.37■□□□□ 0.69
IFT43Q96FT9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.37■□□□□ 0.69
IFT43Q96FT9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.37■□□□□ 0.69
IFT43Q96FT9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.37■□□□□ 0.69
IFT43Q96FT9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.37■□□□□ 0.69
IFT43Q96FT9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.37■□□□□ 0.69
IFT43Q96FT9 FSCN1P1-201ENST00000568912 1481 ntBASIC19.37■□□□□ 0.69
IFT43Q96FT9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
IFT43Q96FT9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.37■□□□□ 0.69
IFT43Q96FT9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
IFT43Q96FT9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.37■□□□□ 0.69
IFT43Q96FT9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.37■□□□□ 0.69
IFT43Q96FT9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
IFT43Q96FT9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
IFT43Q96FT9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
IFT43Q96FT9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.36■□□□□ 0.69
IFT43Q96FT9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 MIR1238-201ENST00000408483 83 ntBASIC19.36■□□□□ 0.69
IFT43Q96FT9 TSPY21P-201ENST00000433481 731 ntBASIC19.36■□□□□ 0.69
IFT43Q96FT9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.36■□□□□ 0.69
IFT43Q96FT9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.36■□□□□ 0.69
IFT43Q96FT9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.36■□□□□ 0.69
IFT43Q96FT9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.36■□□□□ 0.69
IFT43Q96FT9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.36■□□□□ 0.69
IFT43Q96FT9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
IFT43Q96FT9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
IFT43Q96FT9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IFT43Q96FT9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.36■□□□□ 0.69
IFT43Q96FT9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.36■□□□□ 0.69
IFT43Q96FT9 KRT8P41-201ENST00000533985 1514 ntBASIC19.35■□□□□ 0.69
IFT43Q96FT9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.35■□□□□ 0.69
IFT43Q96FT9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
IFT43Q96FT9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.35■□□□□ 0.69
IFT43Q96FT9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.35■□□□□ 0.69
IFT43Q96FT9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.35■□□□□ 0.69
IFT43Q96FT9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.35■□□□□ 0.69
IFT43Q96FT9 NAPSB-206ENST00000562112 1266 ntBASIC19.35■□□□□ 0.69
IFT43Q96FT9 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.35■□□□□ 0.69
IFT43Q96FT9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
IFT43Q96FT9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
IFT43Q96FT9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
IFT43Q96FT9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.35■□□□□ 0.69
IFT43Q96FT9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IFT43Q96FT9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
IFT43Q96FT9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
IFT43Q96FT9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
IFT43Q96FT9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms