Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM54Q969K7 KRT8P9-201ENST00000558927 1449 ntBASIC16.57■□□□□ 0.24
TMEM54Q969K7 AC092338.2-201ENST00000568827 1415 ntBASIC16.57■□□□□ 0.24
TMEM54Q969K7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM54Q969K7 TSPY14P-201ENST00000303979 915 ntBASIC16.57■□□□□ 0.24
TMEM54Q969K7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM54Q969K7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.57■□□□□ 0.24
TMEM54Q969K7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM54Q969K7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.57■□□□□ 0.24
TMEM54Q969K7 MIR4674-201ENST00000582457 87 ntBASIC16.57■□□□□ 0.24
TMEM54Q969K7 AC116562.4-202ENST00000641738 218 ntBASIC16.57■□□□□ 0.24
TMEM54Q969K7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM54Q969K7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM54Q969K7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM54Q969K7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM54Q969K7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM54Q969K7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM54Q969K7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM54Q969K7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM54Q969K7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM54Q969K7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM54Q969K7 AP003041.3-201ENST00000527151 707 ntBASIC16.56■□□□□ 0.24
TMEM54Q969K7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 EGLN1P1-201ENST00000531623 762 ntBASIC16.56■□□□□ 0.24
TMEM54Q969K7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM54Q969K7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TMEM54Q969K7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.56■□□□□ 0.24
TMEM54Q969K7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TMEM54Q969K7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
TMEM54Q969K7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM54Q969K7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TMEM54Q969K7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM54Q969K7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM54Q969K7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM54Q969K7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM54Q969K7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM54Q969K7 CYP2D8P-201ENST00000433633 1490 ntBASIC16.55■□□□□ 0.24
TMEM54Q969K7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM54Q969K7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM54Q969K7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM54Q969K7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TMEM54Q969K7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM54Q969K7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM54Q969K7 MIR564-202ENST00000385049 94 ntBASIC16.55■□□□□ 0.24
TMEM54Q969K7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM54Q969K7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM54Q969K7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM54Q969K7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM54Q969K7 AC007663.1-201ENST00000438948 1240 ntBASIC16.55■□□□□ 0.24
TMEM54Q969K7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM54Q969K7 AC010947.1-201ENST00000623454 693 ntBASIC16.55■□□□□ 0.24
TMEM54Q969K7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.55■□□□□ 0.24
TMEM54Q969K7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM54Q969K7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM54Q969K7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM54Q969K7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM54Q969K7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM54Q969K7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM54Q969K7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
TMEM54Q969K7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM54Q969K7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM54Q969K7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TMEM54Q969K7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM54Q969K7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TMEM54Q969K7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM54Q969K7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM54Q969K7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM54Q969K7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM54Q969K7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TMEM54Q969K7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM54Q969K7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TMEM54Q969K7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TMEM54Q969K7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM54Q969K7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM54Q969K7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
TMEM54Q969K7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM54Q969K7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TMEM54Q969K7 BX088651.1-201ENST00000540551 451 ntBASIC16.54■□□□□ 0.24
TMEM54Q969K7 NAPSB-206ENST00000562112 1266 ntBASIC16.54■□□□□ 0.24
TMEM54Q969K7 AC010653.2-201ENST00000623505 997 ntBASIC16.54■□□□□ 0.24
TMEM54Q969K7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM54Q969K7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM54Q969K7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM54Q969K7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms