Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 LETM1P2-201ENST00000597330 2178 ntBASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 HEIH-201ENST00000623091 1652 ntBASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 KRT8P11-201ENST00000409686 1436 ntBASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 POU5F1P3-201ENST00000428824 1078 ntBASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 KRT16P5-201ENST00000455284 522 ntBASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.53■□□□□ 0.72
ATG4AQ8WYN0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 MTMR9LP-203ENST00000426597 1545 ntBASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 ESRRAP1-201ENST00000400596 1257 ntBASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 AC124016.1-201ENST00000609552 612 ntBASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 AC079598.2-202ENST00000546624 1451 ntBASIC19.52■□□□□ 0.72
ATG4AQ8WYN0 NOC2LP1-202ENST00000452600 2235 ntBASIC19.52■□□□□ 0.71
ATG4AQ8WYN0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATG4AQ8WYN0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.52■□□□□ 0.71
ATG4AQ8WYN0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
ATG4AQ8WYN0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ATG4AQ8WYN0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATG4AQ8WYN0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.51■□□□□ 0.71
ATG4AQ8WYN0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 AC073592.3-201ENST00000625118 1834 ntBASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ATG4AQ8WYN0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms