Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 AL049597.2-201ENST00000565575 961 ntBASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 RN7SL850P-201ENST00000579959 291 ntBASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 BICD1-207ENST00000551848 1962 ntBASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATRIPQ8WXE1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
ATRIPQ8WXE1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
ATRIPQ8WXE1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 AC093525.10-201ENST00000625130 1569 ntBASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATRIPQ8WXE1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 AC104417.2-201ENST00000562989 1793 ntBASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 AC124283.5-201ENST00000624661 1809 ntBASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 AL354751.1-201ENST00000412768 1863 ntBASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATRIPQ8WXE1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 KRASP1-201ENST00000407852 552 ntBASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 RARRES2P10-201ENST00000564312 460 ntBASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 AC090340.1-201ENST00000620778 4980 ntBASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms