Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
SMARCC2Q8TAQ2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 PRSS44-201ENST00000515154 1146 ntBASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 AC104581.1-202ENST00000635932 2618 ntBASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC2Q8TAQ2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 NAPSB-206ENST00000562112 1266 ntBASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 AP005242.2-201ENST00000580065 1175 ntBASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC2Q8TAQ2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 HEIH-201ENST00000623091 1652 ntBASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 CYP2D8P-201ENST00000433633 1490 ntBASIC22.03■■□□□ 1.12
SMARCC2Q8TAQ2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 AC068587.9-201ENST00000641814 219 ntBASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
SMARCC2Q8TAQ2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms