Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.28■□□□□ 0.52
HIPK4Q8NE63 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 AC116351.2-201ENST00000606540 1585 ntBASIC18.28■□□□□ 0.52
HIPK4Q8NE63 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HIPK4Q8NE63 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 GPX1P1-201ENST00000388829 606 ntBASIC18.27■□□□□ 0.52
HIPK4Q8NE63 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 AC133552.2-202ENST00000575694 574 ntBASIC18.27■□□□□ 0.52
HIPK4Q8NE63 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIPK4Q8NE63 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HIPK4Q8NE63 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HIPK4Q8NE63 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HIPK4Q8NE63 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.27■□□□□ 0.51
HIPK4Q8NE63 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HIPK4Q8NE63 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
HIPK4Q8NE63 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HIPK4Q8NE63 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.27■□□□□ 0.51
HIPK4Q8NE63 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 ANO7L1-203ENST00000602586 1720 ntBASIC18.26■□□□□ 0.51
HIPK4Q8NE63 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIPK4Q8NE63 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.25■□□□□ 0.51
HIPK4Q8NE63 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
HIPK4Q8NE63 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIPK4Q8NE63 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIPK4Q8NE63 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.24■□□□□ 0.51
HIPK4Q8NE63 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIPK4Q8NE63 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIPK4Q8NE63 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms