Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CCDC168Q8NDH2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC168Q8NDH2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.71■□□□□ 0.1
CCDC168Q8NDH2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC168Q8NDH2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 MIR3180-5-201ENST00000583743 153 ntBASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 AC116407.3-201ENST00000623905 1129 ntBASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 MCCD1P1-208ENST00000445732 328 ntBASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCDC168Q8NDH2 HLA-J-201ENST00000462773 1622 ntBASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 AC104417.2-201ENST00000562989 1793 ntBASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 AC096582.2-201ENST00000510860 516 ntBASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 AL596442.2-201ENST00000610240 980 ntBASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 AP006288.1-201ENST00000446065 395 ntBASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 HLA-J-202ENST00000469281 1241 ntBASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 FAM197Y3-203ENST00000618346 717 ntBASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC168Q8NDH2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 AC114341.1-201ENST00000618070 349 ntBASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 AC124864.1-201ENST00000623408 392 ntBASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms