Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMG8Q8ND04 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMG8Q8ND04 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SMG8Q8ND04 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMG8Q8ND04 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
SMG8Q8ND04 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMG8Q8ND04 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.28■□□□□ 0.84
SMG8Q8ND04 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMG8Q8ND04 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMG8Q8ND04 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.28■□□□□ 0.84
SMG8Q8ND04 AC068587.9-201ENST00000641814 219 ntBASIC20.28■□□□□ 0.84
SMG8Q8ND04 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMG8Q8ND04 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMG8Q8ND04 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SMG8Q8ND04 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.28■□□□□ 0.84
SMG8Q8ND04 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 HOXB1-202ENST00000577092 1414 ntBASIC20.27■□□□□ 0.84
SMG8Q8ND04 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.27■□□□□ 0.84
SMG8Q8ND04 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.27■□□□□ 0.84
SMG8Q8ND04 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.27■□□□□ 0.84
SMG8Q8ND04 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SMG8Q8ND04 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.27■□□□□ 0.84
SMG8Q8ND04 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.27■□□□□ 0.84
SMG8Q8ND04 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.27■□□□□ 0.84
SMG8Q8ND04 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.27■□□□□ 0.84
SMG8Q8ND04 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
SMG8Q8ND04 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.27■□□□□ 0.84
SMG8Q8ND04 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.27■□□□□ 0.84
SMG8Q8ND04 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
SMG8Q8ND04 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMG8Q8ND04 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SMG8Q8ND04 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.26■□□□□ 0.83
SMG8Q8ND04 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SMG8Q8ND04 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.26■□□□□ 0.83
SMG8Q8ND04 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 AL645929.1-201ENST00000420084 975 ntBASIC20.26■□□□□ 0.83
SMG8Q8ND04 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.26■□□□□ 0.83
SMG8Q8ND04 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.26■□□□□ 0.83
SMG8Q8ND04 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.26■□□□□ 0.83
SMG8Q8ND04 AC104390.1-201ENST00000555663 520 ntBASIC20.26■□□□□ 0.83
SMG8Q8ND04 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.26■□□□□ 0.83
SMG8Q8ND04 KRT8P7-201ENST00000533003 1432 ntBASIC20.26■□□□□ 0.83
SMG8Q8ND04 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMG8Q8ND04 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMG8Q8ND04 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMG8Q8ND04 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.25■□□□□ 0.83
SMG8Q8ND04 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMG8Q8ND04 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SMG8Q8ND04 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMG8Q8ND04 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
SMG8Q8ND04 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMG8Q8ND04 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
SMG8Q8ND04 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMG8Q8ND04 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.25■□□□□ 0.83
SMG8Q8ND04 HLA-F-220ENST00000434407 884 ntBASIC20.25■□□□□ 0.83
SMG8Q8ND04 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.25■□□□□ 0.83
SMG8Q8ND04 AC069148.1-201ENST00000608741 768 ntBASIC20.25■□□□□ 0.83
SMG8Q8ND04 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.25■□□□□ 0.83
SMG8Q8ND04 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.25■□□□□ 0.83
SMG8Q8ND04 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.25■□□□□ 0.83
SMG8Q8ND04 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMG8Q8ND04 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.25■□□□□ 0.83
SMG8Q8ND04 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
SMG8Q8ND04 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMG8Q8ND04 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.25■□□□□ 0.83
SMG8Q8ND04 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMG8Q8ND04 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.24■□□□□ 0.83
SMG8Q8ND04 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.24■□□□□ 0.83
SMG8Q8ND04 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMG8Q8ND04 AC006333.2-201ENST00000607957 2099 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms