Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC89Q8N998 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC89Q8N998 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC89Q8N998 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC89Q8N998 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC89Q8N998 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC89Q8N998 MTDHP1-201ENST00000605323 784 ntBASIC19.55■□□□□ 0.72
CCDC89Q8N998 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC89Q8N998 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC89Q8N998 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC89Q8N998 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC89Q8N998 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC89Q8N998 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC89Q8N998 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC89Q8N998 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC89Q8N998 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC89Q8N998 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.54■□□□□ 0.72
CCDC89Q8N998 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 TSPY23P-201ENST00000440136 739 ntBASIC19.54■□□□□ 0.72
CCDC89Q8N998 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC89Q8N998 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC89Q8N998 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
CCDC89Q8N998 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC89Q8N998 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CCDC89Q8N998 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC89Q8N998 LETM1P2-201ENST00000597330 2178 ntBASIC19.53■□□□□ 0.72
CCDC89Q8N998 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC89Q8N998 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC89Q8N998 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 AC026366.1-201ENST00000488803 879 ntBASIC19.53■□□□□ 0.72
CCDC89Q8N998 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC89Q8N998 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC89Q8N998 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
CCDC89Q8N998 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC89Q8N998 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC89Q8N998 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC89Q8N998 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC89Q8N998 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC89Q8N998 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC89Q8N998 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC89Q8N998 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC89Q8N998 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC89Q8N998 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CCDC89Q8N998 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC89Q8N998 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC89Q8N998 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC89Q8N998 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms