Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LSMEM1Q8N8F7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 AC011298.2-201ENST00000617989 482 ntBASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.23■□□□□ 0.35
LSMEM1Q8N8F7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 AP000997.3-201ENST00000623333 2250 ntBASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 CKBP1-201ENST00000565489 1086 ntBASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 AC068587.9-201ENST00000641814 219 ntBASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 KRT8P32-201ENST00000512863 1461 ntBASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.22■□□□□ 0.35
LSMEM1Q8N8F7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 FSCN1P1-201ENST00000568912 1481 ntBASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 PRORSD1P-201ENST00000295112 541 ntBASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 AC008040.2-201ENST00000461049 708 ntBASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 B3GAT3P1-201ENST00000471720 806 ntBASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 MIR6786-201ENST00000616843 113 ntBASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
LSMEM1Q8N8F7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LSMEM1Q8N8F7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.21■□□□□ 0.34
LSMEM1Q8N8F7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LSMEM1Q8N8F7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.21■□□□□ 0.34
LSMEM1Q8N8F7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms