Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 CCR12P-201ENST00000446203 998 ntBASIC15.26■□□□□ 0.03
LINC00311Q8N616 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00311Q8N616 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 C2orf69P3-201ENST00000565542 1120 ntBASIC15.26■□□□□ 0.03
LINC00311Q8N616 AL353719.1-201ENST00000566847 864 ntBASIC15.26■□□□□ 0.03
LINC00311Q8N616 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00311Q8N616 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
LINC00311Q8N616 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00311Q8N616 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00311Q8N616 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00311Q8N616 KRT8P45-201ENST00000414328 1447 ntBASIC15.26■□□□□ 0.03
LINC00311Q8N616 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINC00311Q8N616 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00311Q8N616 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00311Q8N616 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00311Q8N616 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC00311Q8N616 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00311Q8N616 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00311Q8N616 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC00311Q8N616 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC00311Q8N616 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LINC00311Q8N616 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LINC00311Q8N616 MIR564-202ENST00000385049 94 ntBASIC15.25■□□□□ 0.03
LINC00311Q8N616 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.25■□□□□ 0.03
LINC00311Q8N616 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00311Q8N616 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00311Q8N616 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC00311Q8N616 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00311Q8N616 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC00311Q8N616 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC00311Q8N616 GPAT2P1-201ENST00000444924 1672 ntBASIC15.25■□□□□ 0.03
LINC00311Q8N616 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00311Q8N616 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00311Q8N616 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00311Q8N616 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LINC00311Q8N616 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00311Q8N616 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00311Q8N616 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00311Q8N616 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00311Q8N616 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00311Q8N616 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00311Q8N616 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00311Q8N616 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00311Q8N616 MIR1238-201ENST00000408483 83 ntBASIC15.24■□□□□ 0.03
LINC00311Q8N616 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.24■□□□□ 0.03
LINC00311Q8N616 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00311Q8N616 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00311Q8N616 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00311Q8N616 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00311Q8N616 AC116562.4-202ENST00000641738 218 ntBASIC15.24■□□□□ 0.03
LINC00311Q8N616 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00311Q8N616 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00311Q8N616 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00311Q8N616 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LINC00311Q8N616 AC092338.2-201ENST00000568827 1415 ntBASIC15.24■□□□□ 0.03
LINC00311Q8N616 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00311Q8N616 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LINC00311Q8N616 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00311Q8N616 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00311Q8N616 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00311Q8N616 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 AC008556.1-201ENST00000610908 2040 ntBASIC15.23■□□□□ 0.03
LINC00311Q8N616 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LINC00311Q8N616 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00311Q8N616 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 TSPY14P-201ENST00000303979 915 ntBASIC15.23■□□□□ 0.03
LINC00311Q8N616 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.23■□□□□ 0.03
LINC00311Q8N616 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00311Q8N616 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.23■□□□□ 0.03
LINC00311Q8N616 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00311Q8N616 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LINC00311Q8N616 MIR3180-5-201ENST00000583743 153 ntBASIC15.23■□□□□ 0.03
LINC00311Q8N616 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 AC010653.2-201ENST00000623505 997 ntBASIC15.23■□□□□ 0.03
LINC00311Q8N616 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00311Q8N616 WIZP1-201ENST00000531444 2299 ntBASIC15.23■□□□□ 0.03
LINC00311Q8N616 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00311Q8N616 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00311Q8N616 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00311Q8N616 AC073592.3-201ENST00000625118 1834 ntBASIC15.22■□□□□ 0.03
LINC00311Q8N616 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms