Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 CKBP1-201ENST00000565489 1086 ntBASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 MIR6786-201ENST00000616843 113 ntBASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL3Q8IVW4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 AC008040.2-201ENST00000461049 708 ntBASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 B3GAT3P1-201ENST00000471720 806 ntBASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 AC011506.1-201ENST00000474329 610 ntBASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 AC130371.2-201ENST00000619443 611 ntBASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL3Q8IVW4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDKL3Q8IVW4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDKL3Q8IVW4 NEFHP1-201ENST00000412845 2629 ntBASIC19.33■□□□□ 0.69
CDKL3Q8IVW4 AC104581.1-202ENST00000635932 2618 ntBASIC19.33■□□□□ 0.69
CDKL3Q8IVW4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CDKL3Q8IVW4 PRORSD1P-201ENST00000295112 541 ntBASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 MTMR9LP-203ENST00000426597 1545 ntBASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL3Q8IVW4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 FAM197Y1-201ENST00000421178 764 ntBASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 FSCN1P1-201ENST00000568912 1481 ntBASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL3Q8IVW4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms