Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CRLF3Q8IUI8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 AC098590.1-201ENST00000468126 897 ntBASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 UNC93B4-201ENST00000505679 747 ntBASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 SOX15-203ENST00000570788 1093 ntBASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 AC083906.6-201ENST00000641366 219 ntBASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 AC073648.6-201ENST00000641589 218 ntBASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 AP000997.3-201ENST00000623333 2250 ntBASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CRLF3Q8IUI8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CRLF3Q8IUI8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 KRT8P8-201ENST00000434750 1448 ntBASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms