Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL23A1Q86Y22 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL23A1Q86Y22 HNRNPDP1-201ENST00000439535 754 ntBASIC23.62■■□□□ 1.37
COL23A1Q86Y22 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.62■■□□□ 1.37
COL23A1Q86Y22 AC024563.2-201ENST00000603282 481 ntBASIC23.62■■□□□ 1.37
COL23A1Q86Y22 AC008608.2-201ENST00000606089 416 ntBASIC23.62■■□□□ 1.37
COL23A1Q86Y22 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL23A1Q86Y22 FAM215A-202ENST00000632077 792 ntBASIC23.62■■□□□ 1.37
COL23A1Q86Y22 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL23A1Q86Y22 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL23A1Q86Y22 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.62■■□□□ 1.37
COL23A1Q86Y22 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL23A1Q86Y22 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL23A1Q86Y22 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC23.62■■□□□ 1.37
COL23A1Q86Y22 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL23A1Q86Y22 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.62■■□□□ 1.37
COL23A1Q86Y22 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 AC132008.2-207ENST00000454517 770 ntBASIC23.61■■□□□ 1.37
COL23A1Q86Y22 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 AC011840.4-201ENST00000578471 627 ntBASIC23.61■■□□□ 1.37
COL23A1Q86Y22 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 AL353692.3-201ENST00000407031 1396 ntBASIC23.61■■□□□ 1.37
COL23A1Q86Y22 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.61■■□□□ 1.37
COL23A1Q86Y22 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 TREX1-205ENST00000625293 1783 ntBASIC23.6■■□□□ 1.37
COL23A1Q86Y22 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 AC116407.3-201ENST00000623905 1129 ntBASIC23.6■■□□□ 1.37
COL23A1Q86Y22 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL23A1Q86Y22 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC23.59■■□□□ 1.37
COL23A1Q86Y22 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 PMS2P2-201ENST00000425039 1128 ntBASIC23.58■■□□□ 1.37
COL23A1Q86Y22 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 AC027796.2-201ENST00000575326 344 ntBASIC23.58■■□□□ 1.37
COL23A1Q86Y22 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
COL23A1Q86Y22 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms