Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 AC104076.2-201ENST00000448912 469 ntBASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 NEK4P2-201ENST00000580004 1012 ntBASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRTM4Q86VH4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
LRRTM4Q86VH4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 AK4P3-201ENST00000418260 669 ntBASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 AC117947.1-201ENST00000427448 529 ntBASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 AC139887.4-201ENST00000607877 719 ntBASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 AL031432.5-201ENST00000641059 760 ntBASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRTM4Q86VH4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 AC008556.1-201ENST00000610908 2040 ntBASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 DUX4L26-201ENST00000489078 1255 ntBASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 AL049597.2-201ENST00000565575 961 ntBASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 AC140113.3-201ENST00000605663 199 ntBASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 AC068587.9-201ENST00000641814 219 ntBASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRTM4Q86VH4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 MIR1224-201ENST00000408193 85 ntBASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 YBX1P2-201ENST00000489612 999 ntBASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 AL023973.1-201ENST00000624619 620 ntBASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRTM4Q86VH4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms