Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF550Q7Z398 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF550Q7Z398 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF550Q7Z398 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF550Q7Z398 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF550Q7Z398 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 FAM197Y1-201ENST00000421178 764 ntBASIC17.34■□□□□ 0.37
ZNF550Q7Z398 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 AC026471.5-201ENST00000615068 467 ntBASIC17.34■□□□□ 0.37
ZNF550Q7Z398 AC011298.2-201ENST00000617989 482 ntBASIC17.34■□□□□ 0.37
ZNF550Q7Z398 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF550Q7Z398 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
ZNF550Q7Z398 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF550Q7Z398 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.33■□□□□ 0.37
ZNF550Q7Z398 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
ZNF550Q7Z398 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF550Q7Z398 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNF550Q7Z398 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNF550Q7Z398 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF550Q7Z398 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF550Q7Z398 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF550Q7Z398 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.33■□□□□ 0.37
ZNF550Q7Z398 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF550Q7Z398 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 CD177P1-201ENST00000606252 935 ntBASIC17.32■□□□□ 0.36
ZNF550Q7Z398 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF550Q7Z398 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms