Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.03■□□□□ 0.32
SHFQ7M4L6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHFQ7M4L6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHFQ7M4L6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SHFQ7M4L6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHFQ7M4L6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SHFQ7M4L6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SHFQ7M4L6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHFQ7M4L6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.02■□□□□ 0.32
SHFQ7M4L6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHFQ7M4L6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHFQ7M4L6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.02■□□□□ 0.32
SHFQ7M4L6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHFQ7M4L6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHFQ7M4L6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHFQ7M4L6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHFQ7M4L6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHFQ7M4L6 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.02■□□□□ 0.32
SHFQ7M4L6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.02■□□□□ 0.32
SHFQ7M4L6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SHFQ7M4L6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.02■□□□□ 0.32
SHFQ7M4L6 AC008687.6-201ENST00000596318 630 ntBASIC17.02■□□□□ 0.32
SHFQ7M4L6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SHFQ7M4L6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.02■□□□□ 0.32
SHFQ7M4L6 AC133041.1-202ENST00000642053 222 ntBASIC17.02■□□□□ 0.32
SHFQ7M4L6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
SHFQ7M4L6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SHFQ7M4L6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHFQ7M4L6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.02■□□□□ 0.31
SHFQ7M4L6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHFQ7M4L6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SHFQ7M4L6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 AP000997.3-201ENST00000623333 2250 ntBASIC17.01■□□□□ 0.31
SHFQ7M4L6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
SHFQ7M4L6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.01■□□□□ 0.31
SHFQ7M4L6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SHFQ7M4L6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.01■□□□□ 0.31
SHFQ7M4L6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.01■□□□□ 0.31
SHFQ7M4L6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.01■□□□□ 0.31
SHFQ7M4L6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.01■□□□□ 0.31
SHFQ7M4L6 SOX15-203ENST00000570788 1093 ntBASIC17.01■□□□□ 0.31
SHFQ7M4L6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.01■□□□□ 0.31
SHFQ7M4L6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.01■□□□□ 0.31
SHFQ7M4L6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SHFQ7M4L6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SHFQ7M4L6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
SHFQ7M4L6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHFQ7M4L6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17■□□□□ 0.31
SHFQ7M4L6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SHFQ7M4L6 ABALON-201ENST00000629058 1903 ntBASIC17■□□□□ 0.31
SHFQ7M4L6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHFQ7M4L6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SHFQ7M4L6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17■□□□□ 0.31
SHFQ7M4L6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SHFQ7M4L6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHFQ7M4L6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SHFQ7M4L6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17■□□□□ 0.31
SHFQ7M4L6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17■□□□□ 0.31
SHFQ7M4L6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17■□□□□ 0.31
SHFQ7M4L6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17■□□□□ 0.31
SHFQ7M4L6 AC083880.1-201ENST00000608266 535 ntBASIC17■□□□□ 0.31
SHFQ7M4L6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SHFQ7M4L6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHFQ7M4L6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHFQ7M4L6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SHFQ7M4L6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHFQ7M4L6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SHFQ7M4L6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHFQ7M4L6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.99■□□□□ 0.31
SHFQ7M4L6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms