Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COPS6Q7L5N1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.77■■□□□ 1.4
COPS6Q7L5N1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.77■■□□□ 1.4
COPS6Q7L5N1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
COPS6Q7L5N1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COPS6Q7L5N1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COPS6Q7L5N1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
COPS6Q7L5N1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 AL645929.1-201ENST00000420084 975 ntBASIC23.76■■□□□ 1.39
COPS6Q7L5N1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 HOXB1-202ENST00000577092 1414 ntBASIC23.76■■□□□ 1.39
COPS6Q7L5N1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.76■■□□□ 1.39
COPS6Q7L5N1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 AC104390.1-201ENST00000555663 520 ntBASIC23.75■■□□□ 1.39
COPS6Q7L5N1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 AC068587.9-201ENST00000641814 219 ntBASIC23.75■■□□□ 1.39
COPS6Q7L5N1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
COPS6Q7L5N1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 HLA-F-220ENST00000434407 884 ntBASIC23.74■■□□□ 1.39
COPS6Q7L5N1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
COPS6Q7L5N1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC23.73■■□□□ 1.39
COPS6Q7L5N1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 KRT8P7-201ENST00000533003 1432 ntBASIC23.73■■□□□ 1.39
COPS6Q7L5N1 AL391807.1-203ENST00000604392 2365 ntBASIC23.73■■□□□ 1.39
COPS6Q7L5N1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COPS6Q7L5N1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 AC006333.2-201ENST00000607957 2099 ntBASIC23.72■■□□□ 1.39
COPS6Q7L5N1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 AC010240.3-201ENST00000607688 395 ntBASIC23.72■■□□□ 1.39
COPS6Q7L5N1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms