Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 MFAP1P1-201ENST00000442257 1255 ntBASIC17.65■□□□□ 0.42
RTL4Q6ZR62 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTL4Q6ZR62 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RTL4Q6ZR62 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RTL4Q6ZR62 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
RTL4Q6ZR62 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RTL4Q6ZR62 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
RTL4Q6ZR62 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 KRT8P41-201ENST00000533985 1514 ntBASIC17.64■□□□□ 0.41
RTL4Q6ZR62 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 AC010947.1-201ENST00000623454 693 ntBASIC17.64■□□□□ 0.41
RTL4Q6ZR62 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 KRT18P22-201ENST00000402024 1347 ntBASIC17.64■□□□□ 0.41
RTL4Q6ZR62 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RTL4Q6ZR62 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 AC104417.2-201ENST00000562989 1793 ntBASIC17.63■□□□□ 0.41
RTL4Q6ZR62 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL4Q6ZR62 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 EGLN1P1-201ENST00000531623 762 ntBASIC17.62■□□□□ 0.41
RTL4Q6ZR62 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms