Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 AL158047.1-201ENST00000445918 881 ntBASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 AC133681.1-201ENST00000465482 601 ntBASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 AC098590.1-201ENST00000468126 897 ntBASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 AC004264.1-201ENST00000608354 794 ntBASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 AC110285.5-201ENST00000611501 352 ntBASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 AL359736.2-201ENST00000621992 437 ntBASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF111Q6ZNA4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 GCSHP5-201ENST00000443090 522 ntBASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF111Q6ZNA4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.27■□□□□ 0.51
RNF111Q6ZNA4 AC008764.6-201ENST00000595909 2069 ntBASIC18.27■□□□□ 0.51
RNF111Q6ZNA4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF111Q6ZNA4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF111Q6ZNA4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.27■□□□□ 0.51
RNF111Q6ZNA4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
RNF111Q6ZNA4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 AC009053.2-201ENST00000563701 2365 ntBASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF111Q6ZNA4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF111Q6ZNA4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms