Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 MIR6786-201ENST00000616843 113 ntBASIC21.26■□□□□ 0.99
SHC4Q6S5L8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 AL357033.4-201ENST00000617703 1807 ntBASIC21.26■□□□□ 0.99
SHC4Q6S5L8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SHC4Q6S5L8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SHC4Q6S5L8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 KRT18P29-201ENST00000397031 1267 ntBASIC21.24■□□□□ 0.99
SHC4Q6S5L8 FAM197Y1-201ENST00000421178 764 ntBASIC21.24■□□□□ 0.99
SHC4Q6S5L8 FAM207BP-201ENST00000447172 505 ntBASIC21.24■□□□□ 0.99
SHC4Q6S5L8 AC098590.1-201ENST00000468126 897 ntBASIC21.24■□□□□ 0.99
SHC4Q6S5L8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 FAM197Y4-202ENST00000622692 608 ntBASIC21.24■□□□□ 0.99
SHC4Q6S5L8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SHC4Q6S5L8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SHC4Q6S5L8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHC4Q6S5L8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms