Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 RPS2P4-201ENST00000476944 856 ntBASIC17.15■□□□□ 0.34
NIPAL3Q6P499 AL160286.2-201ENST00000567150 934 ntBASIC17.15■□□□□ 0.34
NIPAL3Q6P499 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 AL353708.3-201ENST00000610272 989 ntBASIC17.15■□□□□ 0.34
NIPAL3Q6P499 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 CR392000.1-201ENST00000624770 1228 ntBASIC17.14■□□□□ 0.33
NIPAL3Q6P499 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 AC083906.6-201ENST00000641366 219 ntBASIC17.14■□□□□ 0.33
NIPAL3Q6P499 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 AL354751.1-201ENST00000412768 1863 ntBASIC17.14■□□□□ 0.33
NIPAL3Q6P499 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.14■□□□□ 0.33
NIPAL3Q6P499 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 KSR1P1-201ENST00000446298 240 ntBASIC17.13■□□□□ 0.33
NIPAL3Q6P499 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 AC073195.1-201ENST00000607241 877 ntBASIC17.13■□□□□ 0.33
NIPAL3Q6P499 AL445675.2-201ENST00000620291 557 ntBASIC17.13■□□□□ 0.33
NIPAL3Q6P499 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 AP006294.2-201ENST00000641667 209 ntBASIC17.13■□□□□ 0.33
NIPAL3Q6P499 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 ANO7L1-203ENST00000602586 1720 ntBASIC17.13■□□□□ 0.33
NIPAL3Q6P499 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NIPAL3Q6P499 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 RPS2P55-201ENST00000397318 883 ntBASIC17.12■□□□□ 0.33
NIPAL3Q6P499 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 AC107956.1-201ENST00000494359 873 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms