Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 AC008550.1-201ENST00000511500 884 ntBASIC17.29■□□□□ 0.36
ZNF544Q6NX49 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 AC233263.1-201ENST00000578059 224 ntBASIC17.29■□□□□ 0.36
ZNF544Q6NX49 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF544Q6NX49 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 AC068880.1-201ENST00000507289 2297 ntBASIC17.28■□□□□ 0.36
ZNF544Q6NX49 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF544Q6NX49 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 MTDHP1-201ENST00000605323 784 ntBASIC17.27■□□□□ 0.36
ZNF544Q6NX49 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ZNF544Q6NX49 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF544Q6NX49 AC139713.2-201ENST00000641328 2723 ntBASIC17.27■□□□□ 0.35
ZNF544Q6NX49 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF544Q6NX49 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF544Q6NX49 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF544Q6NX49 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ZNF544Q6NX49 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF544Q6NX49 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms