Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 AL158211.5-201ENST00000623583 2518 ntBASIC19.7■□□□□ 0.74
TPGS2Q68CL5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPGS2Q68CL5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPGS2Q68CL5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 TSSC2-201ENST00000450217 709 ntBASIC19.69■□□□□ 0.74
TPGS2Q68CL5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPGS2Q68CL5 AC016734.2-201ENST00000624325 1377 ntBASIC19.69■□□□□ 0.74
TPGS2Q68CL5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 KRT8P26-201ENST00000534154 1276 ntBASIC19.68■□□□□ 0.74
TPGS2Q68CL5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 AC068587.9-201ENST00000641814 219 ntBASIC19.68■□□□□ 0.74
TPGS2Q68CL5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.68■□□□□ 0.74
TPGS2Q68CL5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 AL450487.1-201ENST00000426799 995 ntBASIC19.67■□□□□ 0.74
TPGS2Q68CL5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 AC006333.2-201ENST00000607957 2099 ntBASIC19.67■□□□□ 0.74
TPGS2Q68CL5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TPGS2Q68CL5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TPGS2Q68CL5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TPGS2Q68CL5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPGS2Q68CL5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TPGS2Q68CL5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPGS2Q68CL5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPGS2Q68CL5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.66■□□□□ 0.74
TPGS2Q68CL5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 1170.5 ms