Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KHDC1Q4VXA5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KHDC1Q4VXA5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KHDC1Q4VXA5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.06■□□□□ 0.64
KHDC1Q4VXA5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KHDC1Q4VXA5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KHDC1Q4VXA5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KHDC1Q4VXA5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KHDC1Q4VXA5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KHDC1Q4VXA5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.06■□□□□ 0.64
KHDC1Q4VXA5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KHDC1Q4VXA5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.06■□□□□ 0.64
KHDC1Q4VXA5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 AC091390.4-202ENST00000476426 537 ntBASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
KHDC1Q4VXA5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 KRT17P2-201ENST00000300992 1314 ntBASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 RBM17P1-201ENST00000453646 1190 ntBASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KHDC1Q4VXA5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 AC011298.2-201ENST00000617989 482 ntBASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 AC130371.2-201ENST00000619443 611 ntBASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KHDC1Q4VXA5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KHDC1Q4VXA5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms