Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP13A4Q4VNC1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP13A4Q4VNC1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 KRT8P32-201ENST00000512863 1461 ntBASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 FAM207BP-201ENST00000447172 505 ntBASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP13A4Q4VNC1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 KRT8P3-201ENST00000519669 1449 ntBASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 RPS2P55-201ENST00000397318 883 ntBASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 UBE2SP1-201ENST00000450587 669 ntBASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 AC107956.1-201ENST00000494359 873 ntBASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.62■□□□□ 0.73
ATP13A4Q4VNC1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 AC113410.3-201ENST00000623366 203 ntBASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATP13A4Q4VNC1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 Z99916.2-201ENST00000604037 246 ntBASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP13A4Q4VNC1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms