Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 SPDYE15P-201ENST00000424157 909 ntBASIC21.61■■□□□ 1.05
USH1GQ495M9 AL671277.2-201ENST00000458060 996 ntBASIC21.61■■□□□ 1.05
USH1GQ495M9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.61■■□□□ 1.05
USH1GQ495M9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
USH1GQ495M9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 AL358472.4-201ENST00000633140 710 ntBASIC21.61■■□□□ 1.05
USH1GQ495M9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
USH1GQ495M9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
USH1GQ495M9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
USH1GQ495M9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
USH1GQ495M9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USH1GQ495M9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USH1GQ495M9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
USH1GQ495M9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USH1GQ495M9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USH1GQ495M9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
USH1GQ495M9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USH1GQ495M9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USH1GQ495M9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
USH1GQ495M9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.6■■□□□ 1.05
USH1GQ495M9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.6■■□□□ 1.05
USH1GQ495M9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.6■■□□□ 1.05
USH1GQ495M9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.6■■□□□ 1.05
USH1GQ495M9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.6■■□□□ 1.05
USH1GQ495M9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.6■■□□□ 1.05
USH1GQ495M9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.6■■□□□ 1.05
USH1GQ495M9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.6■■□□□ 1.05
USH1GQ495M9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
USH1GQ495M9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
USH1GQ495M9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
USH1GQ495M9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.6■■□□□ 1.05
USH1GQ495M9 AL049812.1-201ENST00000432563 2267 ntBASIC21.59■■□□□ 1.05
USH1GQ495M9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.59■■□□□ 1.05
USH1GQ495M9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
USH1GQ495M9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
USH1GQ495M9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USH1GQ495M9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USH1GQ495M9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
USH1GQ495M9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
USH1GQ495M9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.59■■□□□ 1.05
USH1GQ495M9 AC112907.2-201ENST00000448639 330 ntBASIC21.59■■□□□ 1.05
USH1GQ495M9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.59■■□□□ 1.05
USH1GQ495M9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.59■■□□□ 1.05
USH1GQ495M9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.59■■□□□ 1.05
USH1GQ495M9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.59■■□□□ 1.05
USH1GQ495M9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
USH1GQ495M9 AC005332.7-201ENST00000614046 2005 ntBASIC21.59■■□□□ 1.05
USH1GQ495M9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.59■■□□□ 1.05
USH1GQ495M9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.59■■□□□ 1.05
USH1GQ495M9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.59■■□□□ 1.05
USH1GQ495M9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USH1GQ495M9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
USH1GQ495M9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USH1GQ495M9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USH1GQ495M9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
USH1GQ495M9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
USH1GQ495M9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
USH1GQ495M9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
USH1GQ495M9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.58■■□□□ 1.05
USH1GQ495M9 AL109659.2-201ENST00000606809 1674 ntBASIC21.58■■□□□ 1.05
USH1GQ495M9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
USH1GQ495M9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
USH1GQ495M9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
USH1GQ495M9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.58■■□□□ 1.04
USH1GQ495M9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
USH1GQ495M9 SLC25A24-204ENST00000569674 2357 ntBASIC21.58■■□□□ 1.04
USH1GQ495M9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
USH1GQ495M9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
USH1GQ495M9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.57■■□□□ 1.04
USH1GQ495M9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USH1GQ495M9 AL161938.1-201ENST00000569833 2180 ntBASIC21.57■■□□□ 1.04
USH1GQ495M9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.57■■□□□ 1.04
USH1GQ495M9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
USH1GQ495M9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
USH1GQ495M9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
USH1GQ495M9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.57■■□□□ 1.04
USH1GQ495M9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.57■■□□□ 1.04
USH1GQ495M9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.57■■□□□ 1.04
USH1GQ495M9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
USH1GQ495M9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
USH1GQ495M9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
USH1GQ495M9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.57■■□□□ 1.04
USH1GQ495M9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.57■■□□□ 1.04
USH1GQ495M9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.57■■□□□ 1.04
USH1GQ495M9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USH1GQ495M9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
USH1GQ495M9 KRT8P32-201ENST00000512863 1461 ntBASIC21.57■■□□□ 1.04
USH1GQ495M9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USH1GQ495M9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.56■■□□□ 1.04
USH1GQ495M9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
USH1GQ495M9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
USH1GQ495M9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
USH1GQ495M9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USH1GQ495M9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.56■■□□□ 1.04
USH1GQ495M9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms