Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.97■■□□□ 1.11
SHROOM1Q2M3G4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 AL032819.2-201ENST00000624543 2162 ntBASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.96■■□□□ 1.11
SHROOM1Q2M3G4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.95■■□□□ 1.11
SHROOM1Q2M3G4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 TSSC2-201ENST00000450217 709 ntBASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 FP475955.4-201ENST00000623131 1990 ntBASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHROOM1Q2M3G4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHROOM1Q2M3G4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 MIR564-202ENST00000385049 94 ntBASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 AC010240.3-201ENST00000607688 395 ntBASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHROOM1Q2M3G4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms