Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2B3Q16720 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
ATP2B3Q16720 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.07■■□□□ 1.28
ATP2B3Q16720 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.07■■□□□ 1.28
ATP2B3Q16720 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2B3Q16720 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2B3Q16720 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2B3Q16720 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2B3Q16720 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
ATP2B3Q16720 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC23.07■■□□□ 1.28
ATP2B3Q16720 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.07■■□□□ 1.28
ATP2B3Q16720 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2B3Q16720 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.06■■□□□ 1.28
ATP2B3Q16720 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2B3Q16720 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2B3Q16720 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2B3Q16720 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2B3Q16720 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.06■■□□□ 1.28
ATP2B3Q16720 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2B3Q16720 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC23.06■■□□□ 1.28
ATP2B3Q16720 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC23.06■■□□□ 1.28
ATP2B3Q16720 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC23.06■■□□□ 1.28
ATP2B3Q16720 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.06■■□□□ 1.28
ATP2B3Q16720 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.06■■□□□ 1.28
ATP2B3Q16720 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.06■■□□□ 1.28
ATP2B3Q16720 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23.06■■□□□ 1.28
ATP2B3Q16720 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2B3Q16720 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
ATP2B3Q16720 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.06■■□□□ 1.28
ATP2B3Q16720 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2B3Q16720 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2B3Q16720 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2B3Q16720 AL109659.2-201ENST00000606809 1674 ntBASIC23.06■■□□□ 1.28
ATP2B3Q16720 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ATP2B3Q16720 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.06■■□□□ 1.28
ATP2B3Q16720 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
ATP2B3Q16720 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC23.05■■□□□ 1.28
ATP2B3Q16720 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 AL031133.1-201ENST00000406807 723 ntBASIC23.05■■□□□ 1.28
ATP2B3Q16720 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC23.05■■□□□ 1.28
ATP2B3Q16720 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.05■■□□□ 1.28
ATP2B3Q16720 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP2B3Q16720 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC23.05■■□□□ 1.28
ATP2B3Q16720 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC23.05■■□□□ 1.28
ATP2B3Q16720 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
ATP2B3Q16720 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP2B3Q16720 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP2B3Q16720 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP2B3Q16720 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP2B3Q16720 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
ATP2B3Q16720 KRT8P32-201ENST00000512863 1461 ntBASIC23.05■■□□□ 1.28
ATP2B3Q16720 AC008556.1-201ENST00000610908 2040 ntBASIC23.04■■□□□ 1.28
ATP2B3Q16720 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B3Q16720 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B3Q16720 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B3Q16720 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B3Q16720 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B3Q16720 CD81-212ENST00000526072 1172 ntTSL 5 BASIC23.04■■□□□ 1.28
ATP2B3Q16720 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC23.04■■□□□ 1.28
ATP2B3Q16720 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
ATP2B3Q16720 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B3Q16720 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
ATP2B3Q16720 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP2B3Q16720 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC23.03■■□□□ 1.28
ATP2B3Q16720 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
ATP2B3Q16720 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B3Q16720 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B3Q16720 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.03■■□□□ 1.28
ATP2B3Q16720 AC005332.7-201ENST00000614046 2005 ntBASIC23.03■■□□□ 1.28
ATP2B3Q16720 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B3Q16720 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.03■■□□□ 1.28
ATP2B3Q16720 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.03■■□□□ 1.28
ATP2B3Q16720 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC23.03■■□□□ 1.28
ATP2B3Q16720 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.03■■□□□ 1.28
ATP2B3Q16720 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B3Q16720 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B3Q16720 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
ATP2B3Q16720 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC23.03■■□□□ 1.28
ATP2B3Q16720 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B3Q16720 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B3Q16720 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.03■■□□□ 1.28
ATP2B3Q16720 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP2B3Q16720 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2B3Q16720 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2B3Q16720 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.02■■□□□ 1.28
ATP2B3Q16720 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.02■■□□□ 1.28
ATP2B3Q16720 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ATP2B3Q16720 SPDYE15P-201ENST00000424157 909 ntBASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms