Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.02■□□□□ 0.8
DSC1Q08554 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
DSC1Q08554 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.02■□□□□ 0.8
DSC1Q08554 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
DSC1Q08554 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
DSC1Q08554 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DSC1Q08554 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
DSC1Q08554 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.02■□□□□ 0.79
DSC1Q08554 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
DSC1Q08554 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.02■□□□□ 0.79
DSC1Q08554 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
DSC1Q08554 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
DSC1Q08554 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
DSC1Q08554 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DSC1Q08554 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
DSC1Q08554 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
DSC1Q08554 AL032819.2-201ENST00000624543 2162 ntBASIC20.01■□□□□ 0.79
DSC1Q08554 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.01■□□□□ 0.79
DSC1Q08554 AC006333.2-201ENST00000607957 2099 ntBASIC20.01■□□□□ 0.79
DSC1Q08554 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DSC1Q08554 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DSC1Q08554 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
DSC1Q08554 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DSC1Q08554 AP002383.4-201ENST00000442518 975 ntBASIC20.01■□□□□ 0.79
DSC1Q08554 BX276092.5-203ENST00000456199 560 ntBASIC20.01■□□□□ 0.79
DSC1Q08554 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.01■□□□□ 0.79
DSC1Q08554 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.01■□□□□ 0.79
DSC1Q08554 KRT8P26-201ENST00000534154 1276 ntBASIC20.01■□□□□ 0.79
DSC1Q08554 MIR3180-4-201ENST00000582223 153 ntBASIC20.01■□□□□ 0.79
DSC1Q08554 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.01■□□□□ 0.79
DSC1Q08554 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.01■□□□□ 0.79
DSC1Q08554 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.01■□□□□ 0.79
DSC1Q08554 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DSC1Q08554 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
DSC1Q08554 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.01■□□□□ 0.79
DSC1Q08554 AFG3L1P-217ENST00000557444 2447 ntBASIC20.01■□□□□ 0.79
DSC1Q08554 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DSC1Q08554 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20■□□□□ 0.79
DSC1Q08554 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
DSC1Q08554 AC093484.2-201ENST00000580996 2166 ntBASIC20■□□□□ 0.79
DSC1Q08554 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20■□□□□ 0.79
DSC1Q08554 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DSC1Q08554 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DSC1Q08554 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20■□□□□ 0.79
DSC1Q08554 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20■□□□□ 0.79
DSC1Q08554 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
DSC1Q08554 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20■□□□□ 0.79
DSC1Q08554 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20■□□□□ 0.79
DSC1Q08554 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20■□□□□ 0.79
DSC1Q08554 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20■□□□□ 0.79
DSC1Q08554 AL121894.2-201ENST00000602977 491 ntBASIC20■□□□□ 0.79
DSC1Q08554 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20■□□□□ 0.79
DSC1Q08554 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
DSC1Q08554 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DSC1Q08554 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
DSC1Q08554 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
DSC1Q08554 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DSC1Q08554 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
DSC1Q08554 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20■□□□□ 0.79
DSC1Q08554 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DSC1Q08554 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
DSC1Q08554 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20■□□□□ 0.79
DSC1Q08554 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
DSC1Q08554 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
DSC1Q08554 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DSC1Q08554 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DSC1Q08554 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DSC1Q08554 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DSC1Q08554 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DSC1Q08554 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DSC1Q08554 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
DSC1Q08554 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.99■□□□□ 0.79
DSC1Q08554 RNF126P1-202ENST00000569893 925 ntBASIC19.99■□□□□ 0.79
DSC1Q08554 AC012313.10-201ENST00000623509 926 ntBASIC19.99■□□□□ 0.79
DSC1Q08554 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
DSC1Q08554 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.99■□□□□ 0.79
DSC1Q08554 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DSC1Q08554 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.99■□□□□ 0.79
DSC1Q08554 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DSC1Q08554 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
DSC1Q08554 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.99■□□□□ 0.79
DSC1Q08554 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DSC1Q08554 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
DSC1Q08554 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DSC1Q08554 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DSC1Q08554 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DSC1Q08554 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DSC1Q08554 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DSC1Q08554 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
DSC1Q08554 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
DSC1Q08554 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
DSC1Q08554 PVRIG2P-201ENST00000435460 978 ntBASIC19.98■□□□□ 0.79
DSC1Q08554 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.98■□□□□ 0.79
DSC1Q08554 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
DSC1Q08554 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.98■□□□□ 0.79
DSC1Q08554 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.98■□□□□ 0.79
DSC1Q08554 AC092329.2-201ENST00000598402 547 ntBASIC19.98■□□□□ 0.79
DSC1Q08554 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.98■□□□□ 0.79
DSC1Q08554 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
DSC1Q08554 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms