Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.84□□□□□ -0.03
CCL20P78556 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL20P78556 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL20P78556 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL20P78556 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL20P78556 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL20P78556 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.84□□□□□ -0.03
CCL20P78556 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL20P78556 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.84□□□□□ -0.03
CCL20P78556 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL20P78556 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.84□□□□□ -0.03
CCL20P78556 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL20P78556 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL20P78556 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL20P78556 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.84□□□□□ -0.03
CCL20P78556 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CCL20P78556 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL20P78556 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL20P78556 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL20P78556 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.84□□□□□ -0.03
CCL20P78556 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL20P78556 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL20P78556 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCL20P78556 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CCL20P78556 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CCL20P78556 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCL20P78556 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.83□□□□□ -0.03
CCL20P78556 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCL20P78556 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL20P78556 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.83□□□□□ -0.04
CCL20P78556 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL20P78556 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
CCL20P78556 MIR6084-201ENST00000622012 110 ntBASIC14.83□□□□□ -0.04
CCL20P78556 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL20P78556 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.83□□□□□ -0.04
CCL20P78556 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCL20P78556 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CCL20P78556 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL20P78556 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CCL20P78556 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL20P78556 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL20P78556 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL20P78556 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL20P78556 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.82□□□□□ -0.04
CCL20P78556 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL20P78556 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCL20P78556 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCL20P78556 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCL20P78556 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL20P78556 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.82□□□□□ -0.04
CCL20P78556 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL20P78556 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.82□□□□□ -0.04
CCL20P78556 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 AL499627.1-201ENST00000569373 2188 ntBASIC14.82□□□□□ -0.04
CCL20P78556 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
CCL20P78556 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCL20P78556 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL20P78556 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL20P78556 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.82□□□□□ -0.04
CCL20P78556 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 AC011270.2-201ENST00000624293 2550 ntBASIC14.81□□□□□ -0.04
CCL20P78556 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL20P78556 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms