Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.58■□□□□ 0.24
NKX6-1P78426 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-1P78426 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-1P78426 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.58■□□□□ 0.24
NKX6-1P78426 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.58■□□□□ 0.24
NKX6-1P78426 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-1P78426 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NKX6-1P78426 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.58■□□□□ 0.24
NKX6-1P78426 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NKX6-1P78426 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-1P78426 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX6-1P78426 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX6-1P78426 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NKX6-1P78426 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-1P78426 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-1P78426 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.57■□□□□ 0.24
NKX6-1P78426 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NKX6-1P78426 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
NKX6-1P78426 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX6-1P78426 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-1P78426 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NKX6-1P78426 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-1P78426 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-1P78426 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-1P78426 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.57■□□□□ 0.24
NKX6-1P78426 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX6-1P78426 AC009947.2-201ENST00000444014 672 ntBASIC16.57■□□□□ 0.24
NKX6-1P78426 FAM207BP-201ENST00000447172 505 ntBASIC16.57■□□□□ 0.24
NKX6-1P78426 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-1P78426 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-1P78426 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-1P78426 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.57■□□□□ 0.24
NKX6-1P78426 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.57■□□□□ 0.24
NKX6-1P78426 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.57■□□□□ 0.24
NKX6-1P78426 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.57■□□□□ 0.24
NKX6-1P78426 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-1P78426 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-1P78426 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.57■□□□□ 0.24
NKX6-1P78426 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-1P78426 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.56■□□□□ 0.24
NKX6-1P78426 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-1P78426 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-1P78426 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-1P78426 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-1P78426 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-1P78426 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NKX6-1P78426 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.56■□□□□ 0.24
NKX6-1P78426 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NKX6-1P78426 AC096733.2-201ENST00000609937 1394 ntBASIC16.56■□□□□ 0.24
NKX6-1P78426 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.56■□□□□ 0.24
NKX6-1P78426 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.56■□□□□ 0.24
NKX6-1P78426 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
NKX6-1P78426 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.56■□□□□ 0.24
NKX6-1P78426 COX11P1-201ENST00000489116 835 ntBASIC16.56■□□□□ 0.24
NKX6-1P78426 YBX1P2-201ENST00000489612 999 ntBASIC16.56■□□□□ 0.24
NKX6-1P78426 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.56■□□□□ 0.24
NKX6-1P78426 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
NKX6-1P78426 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.56■□□□□ 0.24
NKX6-1P78426 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.56■□□□□ 0.24
NKX6-1P78426 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.56■□□□□ 0.24
NKX6-1P78426 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.56■□□□□ 0.24
NKX6-1P78426 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-1P78426 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-1P78426 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-1P78426 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-1P78426 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-1P78426 BCL2-203ENST00000589955 5011 ntBASIC16.56■□□□□ 0.24
NKX6-1P78426 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-1P78426 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-1P78426 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-1P78426 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX6-1P78426 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-1P78426 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX6-1P78426 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NKX6-1P78426 AC018445.3-201ENST00000624177 1945 ntBASIC16.55■□□□□ 0.24
NKX6-1P78426 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-1P78426 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NKX6-1P78426 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-1P78426 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-1P78426 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-1P78426 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX6-1P78426 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-1P78426 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.55■□□□□ 0.24
NKX6-1P78426 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX6-1P78426 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.55■□□□□ 0.24
NKX6-1P78426 AL138966.2-201ENST00000621997 464 ntBASIC16.55■□□□□ 0.24
NKX6-1P78426 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-1P78426 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-1P78426 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX6-1P78426 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-1P78426 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NKX6-1P78426 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NKX6-1P78426 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
NKX6-1P78426 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NKX6-1P78426 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-1P78426 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms