Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAV3P56539 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAV3P56539 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
CAV3P56539 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAV3P56539 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAV3P56539 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.78■□□□□ 0.28
CAV3P56539 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.78■□□□□ 0.28
CAV3P56539 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CAV3P56539 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.78■□□□□ 0.28
CAV3P56539 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.78■□□□□ 0.28
CAV3P56539 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.78■□□□□ 0.28
CAV3P56539 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.78■□□□□ 0.28
CAV3P56539 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CAV3P56539 MYC-209ENST00000641252 345 ntBASIC16.78■□□□□ 0.28
CAV3P56539 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.78■□□□□ 0.28
CAV3P56539 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CAV3P56539 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CAV3P56539 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CAV3P56539 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.78■□□□□ 0.28
CAV3P56539 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CAV3P56539 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAV3P56539 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.77■□□□□ 0.28
CAV3P56539 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAV3P56539 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAV3P56539 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAV3P56539 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAV3P56539 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CAV3P56539 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.77■□□□□ 0.28
CAV3P56539 AC116351.2-201ENST00000606540 1585 ntBASIC16.77■□□□□ 0.28
CAV3P56539 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.77■□□□□ 0.28
CAV3P56539 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAV3P56539 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAV3P56539 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAV3P56539 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CAV3P56539 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAV3P56539 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.77■□□□□ 0.28
CAV3P56539 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CAV3P56539 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAV3P56539 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CAV3P56539 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAV3P56539 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAV3P56539 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.77■□□□□ 0.28
CAV3P56539 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CAV3P56539 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.77■□□□□ 0.28
CAV3P56539 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CAV3P56539 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CAV3P56539 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.77■□□□□ 0.28
CAV3P56539 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.77■□□□□ 0.28
CAV3P56539 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.77■□□□□ 0.28
CAV3P56539 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.77■□□□□ 0.28
CAV3P56539 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAV3P56539 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.77■□□□□ 0.28
CAV3P56539 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.77■□□□□ 0.28
CAV3P56539 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAV3P56539 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAV3P56539 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CAV3P56539 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CAV3P56539 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.77■□□□□ 0.27
CAV3P56539 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.77■□□□□ 0.27
CAV3P56539 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAV3P56539 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAV3P56539 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.77■□□□□ 0.27
CAV3P56539 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CAV3P56539 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.76■□□□□ 0.27
CAV3P56539 AC126763.1-201ENST00000552015 2118 ntBASIC16.76■□□□□ 0.27
CAV3P56539 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CAV3P56539 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
CAV3P56539 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CAV3P56539 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CAV3P56539 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CAV3P56539 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CAV3P56539 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAV3P56539 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAV3P56539 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAV3P56539 AC008764.6-201ENST00000595909 2069 ntBASIC16.76■□□□□ 0.27
CAV3P56539 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.76■□□□□ 0.27
CAV3P56539 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAV3P56539 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAV3P56539 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAV3P56539 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.76■□□□□ 0.27
CAV3P56539 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAV3P56539 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAV3P56539 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAV3P56539 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAV3P56539 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms