Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXG1P55316 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXG1P55316 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
FOXG1P55316 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXG1P55316 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXG1P55316 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXG1P55316 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXG1P55316 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXG1P55316 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXG1P55316 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXG1P55316 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
FOXG1P55316 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXG1P55316 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXG1P55316 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXG1P55316 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXG1P55316 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXG1P55316 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXG1P55316 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
FOXG1P55316 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXG1P55316 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXG1P55316 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXG1P55316 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.49■□□□□ 0.23
FOXG1P55316 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXG1P55316 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXG1P55316 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXG1P55316 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FOXG1P55316 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
FOXG1P55316 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXG1P55316 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXG1P55316 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXG1P55316 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXG1P55316 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXG1P55316 AC098818.2-201ENST00000564925 2320 ntBASIC16.48■□□□□ 0.23
FOXG1P55316 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.48■□□□□ 0.23
FOXG1P55316 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXG1P55316 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.48■□□□□ 0.23
FOXG1P55316 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXG1P55316 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXG1P55316 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXG1P55316 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXG1P55316 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXG1P55316 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXG1P55316 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXG1P55316 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXG1P55316 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.48■□□□□ 0.23
FOXG1P55316 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.48■□□□□ 0.23
FOXG1P55316 MIR3180-5-201ENST00000583743 153 ntBASIC16.48■□□□□ 0.23
FOXG1P55316 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.48■□□□□ 0.23
FOXG1P55316 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXG1P55316 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXG1P55316 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXG1P55316 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.48■□□□□ 0.23
FOXG1P55316 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXG1P55316 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.48■□□□□ 0.23
FOXG1P55316 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXG1P55316 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
FOXG1P55316 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
FOXG1P55316 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.47■□□□□ 0.23
FOXG1P55316 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
FOXG1P55316 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
FOXG1P55316 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.47■□□□□ 0.23
FOXG1P55316 AL109659.2-201ENST00000606809 1674 ntBASIC16.47■□□□□ 0.23
FOXG1P55316 HEIH-201ENST00000623091 1652 ntBASIC16.47■□□□□ 0.23
FOXG1P55316 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXG1P55316 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXG1P55316 AIRN-201ENST00000601203 4374 ntBASIC16.47■□□□□ 0.23
FOXG1P55316 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
FOXG1P55316 MTMR9LP-203ENST00000426597 1545 ntBASIC16.47■□□□□ 0.23
FOXG1P55316 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXG1P55316 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
FOXG1P55316 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 BX664615.1-201ENST00000443558 458 ntBASIC16.47■□□□□ 0.23
FOXG1P55316 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
FOXG1P55316 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXG1P55316 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
FOXG1P55316 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
FOXG1P55316 WWOX-216ENST00000569818 525 ntBASIC16.47■□□□□ 0.23
FOXG1P55316 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXG1P55316 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
FOXG1P55316 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.47■□□□□ 0.23
FOXG1P55316 AC011558.1-201ENST00000623459 338 ntBASIC16.47■□□□□ 0.23
FOXG1P55316 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms