Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.6■□□□□ 0.89
NCKAP1LP55160 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.6■□□□□ 0.89
NCKAP1LP55160 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.6■□□□□ 0.89
NCKAP1LP55160 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NCKAP1LP55160 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 AL137013.1-201ENST00000432946 1228 ntBASIC20.6■□□□□ 0.89
NCKAP1LP55160 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.6■□□□□ 0.89
NCKAP1LP55160 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NCKAP1LP55160 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.6■□□□□ 0.89
NCKAP1LP55160 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCKAP1LP55160 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.59■□□□□ 0.89
NCKAP1LP55160 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1LP55160 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1LP55160 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.59■□□□□ 0.89
NCKAP1LP55160 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1LP55160 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1LP55160 RCN1P1-201ENST00000400413 996 ntBASIC20.59■□□□□ 0.89
NCKAP1LP55160 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.59■□□□□ 0.89
NCKAP1LP55160 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.59■□□□□ 0.89
NCKAP1LP55160 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.59■□□□□ 0.89
NCKAP1LP55160 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1LP55160 TNXA-203ENST00000507684 2038 ntBASIC20.59■□□□□ 0.89
NCKAP1LP55160 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1LP55160 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1LP55160 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
NCKAP1LP55160 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NCKAP1LP55160 AL031598.1-201ENST00000561511 1773 ntBASIC20.59■□□□□ 0.89
NCKAP1LP55160 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NCKAP1LP55160 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
NCKAP1LP55160 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCKAP1LP55160 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
NCKAP1LP55160 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NCKAP1LP55160 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCKAP1LP55160 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCKAP1LP55160 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCKAP1LP55160 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCKAP1LP55160 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NCKAP1LP55160 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCKAP1LP55160 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCKAP1LP55160 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.58■□□□□ 0.89
NCKAP1LP55160 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.58■□□□□ 0.89
NCKAP1LP55160 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCKAP1LP55160 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.58■□□□□ 0.89
NCKAP1LP55160 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.58■□□□□ 0.89
NCKAP1LP55160 AC141257.4-201ENST00000634557 245 ntBASIC20.58■□□□□ 0.89
NCKAP1LP55160 AC136944.6-201ENST00000634818 245 ntBASIC20.58■□□□□ 0.89
NCKAP1LP55160 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NCKAP1LP55160 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCKAP1LP55160 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.58■□□□□ 0.88
NCKAP1LP55160 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCKAP1LP55160 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NCKAP1LP55160 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCKAP1LP55160 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NCKAP1LP55160 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKAP1LP55160 Z98044.1-201ENST00000632503 1764 ntBASIC20.57■□□□□ 0.88
NCKAP1LP55160 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKAP1LP55160 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKAP1LP55160 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.57■□□□□ 0.88
NCKAP1LP55160 LIN28AP1-201ENST00000429574 405 ntBASIC20.57■□□□□ 0.88
NCKAP1LP55160 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKAP1LP55160 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.57■□□□□ 0.88
NCKAP1LP55160 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.57■□□□□ 0.88
NCKAP1LP55160 KRT18P57-201ENST00000443599 1254 ntBASIC20.57■□□□□ 0.88
NCKAP1LP55160 AC009947.2-201ENST00000444014 672 ntBASIC20.57■□□□□ 0.88
NCKAP1LP55160 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.57■□□□□ 0.88
NCKAP1LP55160 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NCKAP1LP55160 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.57■□□□□ 0.88
NCKAP1LP55160 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NCKAP1LP55160 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKAP1LP55160 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKAP1LP55160 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.57■□□□□ 0.88
NCKAP1LP55160 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NCKAP1LP55160 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NCKAP1LP55160 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKAP1LP55160 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NCKAP1LP55160 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKAP1LP55160 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NCKAP1LP55160 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NCKAP1LP55160 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKAP1LP55160 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NCKAP1LP55160 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKAP1LP55160 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.56■□□□□ 0.88
NCKAP1LP55160 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKAP1LP55160 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKAP1LP55160 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.56■□□□□ 0.88
NCKAP1LP55160 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NCKAP1LP55160 ATP5G1P1-201ENST00000448724 379 ntBASIC20.56■□□□□ 0.88
NCKAP1LP55160 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NCKAP1LP55160 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.56■□□□□ 0.88
NCKAP1LP55160 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms