Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.99■□□□□ 0.63
LIMK2P53671 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.99■□□□□ 0.63
LIMK2P53671 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LIMK2P53671 UNC93B2-201ENST00000285383 730 ntBASIC18.99■□□□□ 0.63
LIMK2P53671 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LIMK2P53671 TSPY23P-201ENST00000440136 739 ntBASIC18.99■□□□□ 0.63
LIMK2P53671 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.99■□□□□ 0.63
LIMK2P53671 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.99■□□□□ 0.63
LIMK2P53671 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 CR392000.1-201ENST00000624770 1228 ntBASIC18.99■□□□□ 0.63
LIMK2P53671 AIRN-201ENST00000601203 4374 ntBASIC18.99■□□□□ 0.63
LIMK2P53671 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LIMK2P53671 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 ANO7L1-203ENST00000602586 1720 ntBASIC18.99■□□□□ 0.63
LIMK2P53671 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LIMK2P53671 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
LIMK2P53671 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LIMK2P53671 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.98■□□□□ 0.63
LIMK2P53671 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
LIMK2P53671 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.98■□□□□ 0.63
LIMK2P53671 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.98■□□□□ 0.63
LIMK2P53671 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.98■□□□□ 0.63
LIMK2P53671 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.98■□□□□ 0.63
LIMK2P53671 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.98■□□□□ 0.63
LIMK2P53671 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.98■□□□□ 0.63
LIMK2P53671 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 KRT16P1-201ENST00000399124 1418 ntBASIC18.98■□□□□ 0.63
LIMK2P53671 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.98■□□□□ 0.63
LIMK2P53671 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LIMK2P53671 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK2P53671 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK2P53671 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK2P53671 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK2P53671 AC135050.7-201ENST00000624508 2218 ntBASIC18.97■□□□□ 0.63
LIMK2P53671 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK2P53671 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK2P53671 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK2P53671 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK2P53671 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK2P53671 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK2P53671 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK2P53671 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK2P53671 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.97■□□□□ 0.63
LIMK2P53671 AC116562.2-201ENST00000507042 360 ntBASIC18.97■□□□□ 0.63
LIMK2P53671 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK2P53671 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.97■□□□□ 0.63
LIMK2P53671 AC010331.1-201ENST00000611423 582 ntBASIC18.97■□□□□ 0.63
LIMK2P53671 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.97■□□□□ 0.63
LIMK2P53671 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK2P53671 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK2P53671 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
LIMK2P53671 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK2P53671 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK2P53671 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LIMK2P53671 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LIMK2P53671 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK2P53671 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK2P53671 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.97■□□□□ 0.63
LIMK2P53671 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LIMK2P53671 AC079598.2-202ENST00000546624 1451 ntBASIC18.97■□□□□ 0.63
LIMK2P53671 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK2P53671 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK2P53671 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LIMK2P53671 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK2P53671 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK2P53671 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK2P53671 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.96■□□□□ 0.63
LIMK2P53671 RCN1P1-201ENST00000400413 996 ntBASIC18.96■□□□□ 0.63
LIMK2P53671 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.96■□□□□ 0.63
LIMK2P53671 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.96■□□□□ 0.63
LIMK2P53671 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
LIMK2P53671 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK2P53671 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK2P53671 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.96■□□□□ 0.63
LIMK2P53671 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.96■□□□□ 0.63
LIMK2P53671 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK2P53671 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LIMK2P53671 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms