Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDR1P51861 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CDR1P51861 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDR1P51861 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.57■□□□□ 0.88
CDR1P51861 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDR1P51861 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDR1P51861 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDR1P51861 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CDR1P51861 RCN1P1-201ENST00000400413 996 ntBASIC20.57■□□□□ 0.88
CDR1P51861 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.57■□□□□ 0.88
CDR1P51861 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDR1P51861 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.57■□□□□ 0.88
CDR1P51861 AC097488.1-201ENST00000507834 756 ntBASIC20.57■□□□□ 0.88
CDR1P51861 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.57■□□□□ 0.88
CDR1P51861 AC012306.2-201ENST00000609350 630 ntBASIC20.57■□□□□ 0.88
CDR1P51861 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.57■□□□□ 0.88
CDR1P51861 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.57■□□□□ 0.88
CDR1P51861 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDR1P51861 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDR1P51861 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CDR1P51861 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.57■□□□□ 0.88
CDR1P51861 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CDR1P51861 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.57■□□□□ 0.88
CDR1P51861 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDR1P51861 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDR1P51861 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.56■□□□□ 0.88
CDR1P51861 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR1P51861 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR1P51861 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDR1P51861 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR1P51861 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR1P51861 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR1P51861 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CDR1P51861 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.56■□□□□ 0.88
CDR1P51861 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR1P51861 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDR1P51861 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDR1P51861 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR1P51861 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDR1P51861 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR1P51861 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CDR1P51861 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR1P51861 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDR1P51861 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.56■□□□□ 0.88
CDR1P51861 FSCN1P1-201ENST00000568912 1481 ntBASIC20.56■□□□□ 0.88
CDR1P51861 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.56■□□□□ 0.88
CDR1P51861 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.55■□□□□ 0.88
CDR1P51861 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.55■□□□□ 0.88
CDR1P51861 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.55■□□□□ 0.88
CDR1P51861 AC091390.4-202ENST00000476426 537 ntBASIC20.55■□□□□ 0.88
CDR1P51861 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.55■□□□□ 0.88
CDR1P51861 Z85996.1-201ENST00000494644 937 ntBASIC20.55■□□□□ 0.88
CDR1P51861 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.55■□□□□ 0.88
CDR1P51861 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.55■□□□□ 0.88
CDR1P51861 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CDR1P51861 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 LINC01568-207ENST00000641790 1380 ntBASIC20.55■□□□□ 0.88
CDR1P51861 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.55■□□□□ 0.88
CDR1P51861 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDR1P51861 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.54■□□□□ 0.88
CDR1P51861 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.54■□□□□ 0.88
CDR1P51861 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR1P51861 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR1P51861 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDR1P51861 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR1P51861 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CDR1P51861 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR1P51861 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDR1P51861 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDR1P51861 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR1P51861 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR1P51861 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR1P51861 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CDR1P51861 KRT18P57-201ENST00000443599 1254 ntBASIC20.54■□□□□ 0.88
CDR1P51861 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.54■□□□□ 0.88
CDR1P51861 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.54■□□□□ 0.88
CDR1P51861 FITM1-202ENST00000559294 800 ntBASIC20.54■□□□□ 0.88
CDR1P51861 RN7SL850P-201ENST00000579959 291 ntBASIC20.54■□□□□ 0.88
CDR1P51861 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDR1P51861 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.54■□□□□ 0.88
CDR1P51861 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.54■□□□□ 0.88
CDR1P51861 AC097493.4-201ENST00000641197 219 ntBASIC20.54■□□□□ 0.88
CDR1P51861 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDR1P51861 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms