Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 KRT18P57-201ENST00000443599 1254 ntBASIC21.26■□□□□ 0.99
USP11P51784 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
USP11P51784 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.26■□□□□ 0.99
USP11P51784 RN7SL850P-201ENST00000579959 291 ntBASIC21.26■□□□□ 0.99
USP11P51784 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP11P51784 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP11P51784 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.26■□□□□ 0.99
USP11P51784 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP11P51784 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
USP11P51784 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.26■□□□□ 0.99
USP11P51784 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.26■□□□□ 0.99
USP11P51784 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.26■□□□□ 0.99
USP11P51784 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.25■□□□□ 0.99
USP11P51784 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
USP11P51784 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
USP11P51784 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.25■□□□□ 0.99
USP11P51784 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.25■□□□□ 0.99
USP11P51784 AL357033.4-201ENST00000617703 1807 ntBASIC21.25■□□□□ 0.99
USP11P51784 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
USP11P51784 AC009947.2-201ENST00000444014 672 ntBASIC21.25■□□□□ 0.99
USP11P51784 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.25■□□□□ 0.99
USP11P51784 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
USP11P51784 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
USP11P51784 KRT18P21-201ENST00000515767 1272 ntBASIC21.25■□□□□ 0.99
USP11P51784 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.25■□□□□ 0.99
USP11P51784 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
USP11P51784 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.25■□□□□ 0.99
USP11P51784 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.25■□□□□ 0.99
USP11P51784 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.25■□□□□ 0.99
USP11P51784 AL031432.5-201ENST00000641059 760 ntBASIC21.25■□□□□ 0.99
USP11P51784 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
USP11P51784 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.25■□□□□ 0.99
USP11P51784 AC018445.3-201ENST00000624177 1945 ntBASIC21.25■□□□□ 0.99
USP11P51784 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.25■□□□□ 0.99
USP11P51784 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.25■□□□□ 0.99
USP11P51784 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
USP11P51784 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP11P51784 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.24■□□□□ 0.99
USP11P51784 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.24■□□□□ 0.99
USP11P51784 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.24■□□□□ 0.99
USP11P51784 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
USP11P51784 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.24■□□□□ 0.99
USP11P51784 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP11P51784 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP11P51784 AP000523.1-201ENST00000398242 1049 ntBASIC21.24■□□□□ 0.99
USP11P51784 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.24■□□□□ 0.99
USP11P51784 TMPOP1-202ENST00000424642 1267 ntBASIC21.24■□□□□ 0.99
USP11P51784 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.24■□□□□ 0.99
USP11P51784 COX11P1-201ENST00000489116 835 ntBASIC21.24■□□□□ 0.99
USP11P51784 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.24■□□□□ 0.99
USP11P51784 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.24■□□□□ 0.99
USP11P51784 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
USP11P51784 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP11P51784 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP11P51784 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
USP11P51784 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP11P51784 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.24■□□□□ 0.99
USP11P51784 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
USP11P51784 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.23■□□□□ 0.99
USP11P51784 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 KRT8P7-201ENST00000533003 1432 ntBASIC21.23■□□□□ 0.99
USP11P51784 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.23■□□□□ 0.99
USP11P51784 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.23■□□□□ 0.99
USP11P51784 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 AC104076.2-201ENST00000448912 469 ntBASIC21.23■□□□□ 0.99
USP11P51784 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.23■□□□□ 0.99
USP11P51784 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.23■□□□□ 0.99
USP11P51784 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.23■□□□□ 0.99
USP11P51784 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.23■□□□□ 0.99
USP11P51784 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
USP11P51784 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.23■□□□□ 0.99
USP11P51784 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP11P51784 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms