Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AC138932.1-201ENST00000534164 6830 ntBASIC20.33■□□□□ 0.85
PDE6CP51160 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6CP51160 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6CP51160 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6CP51160 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6CP51160 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6CP51160 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.33■□□□□ 0.85
PDE6CP51160 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6CP51160 B3GAT3P1-201ENST00000471720 806 ntBASIC20.33■□□□□ 0.85
PDE6CP51160 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.33■□□□□ 0.85
PDE6CP51160 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDE6CP51160 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PDE6CP51160 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.33■□□□□ 0.85
PDE6CP51160 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.33■□□□□ 0.85
PDE6CP51160 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDE6CP51160 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.33■□□□□ 0.84
PDE6CP51160 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDE6CP51160 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PDE6CP51160 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDE6CP51160 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDE6CP51160 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PDE6CP51160 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDE6CP51160 AP005242.2-201ENST00000580065 1175 ntBASIC20.32■□□□□ 0.84
PDE6CP51160 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.32■□□□□ 0.84
PDE6CP51160 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.32■□□□□ 0.84
PDE6CP51160 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.32■□□□□ 0.84
PDE6CP51160 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.32■□□□□ 0.84
PDE6CP51160 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.32■□□□□ 0.84
PDE6CP51160 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
PDE6CP51160 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PDE6CP51160 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.32■□□□□ 0.84
PDE6CP51160 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDE6CP51160 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
PDE6CP51160 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.31■□□□□ 0.84
PDE6CP51160 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.31■□□□□ 0.84
PDE6CP51160 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.31■□□□□ 0.84
PDE6CP51160 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.31■□□□□ 0.84
PDE6CP51160 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
PDE6CP51160 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PDE6CP51160 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.31■□□□□ 0.84
PDE6CP51160 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.31■□□□□ 0.84
PDE6CP51160 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDE6CP51160 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6CP51160 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6CP51160 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.3■□□□□ 0.84
PDE6CP51160 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.3■□□□□ 0.84
PDE6CP51160 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PDE6CP51160 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.3■□□□□ 0.84
PDE6CP51160 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.3■□□□□ 0.84
PDE6CP51160 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6CP51160 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PDE6CP51160 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6CP51160 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6CP51160 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
PDE6CP51160 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.3■□□□□ 0.84
PDE6CP51160 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.3■□□□□ 0.84
PDE6CP51160 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.3■□□□□ 0.84
PDE6CP51160 KRT18P21-201ENST00000515767 1272 ntBASIC20.3■□□□□ 0.84
PDE6CP51160 C2orf69P3-201ENST00000565542 1120 ntBASIC20.3■□□□□ 0.84
PDE6CP51160 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.3■□□□□ 0.84
PDE6CP51160 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6CP51160 LINC01568-207ENST00000641790 1380 ntBASIC20.3■□□□□ 0.84
PDE6CP51160 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6CP51160 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6CP51160 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6CP51160 KRT18P22-201ENST00000402024 1347 ntBASIC20.29■□□□□ 0.84
PDE6CP51160 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.29■□□□□ 0.84
PDE6CP51160 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6CP51160 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.29■□□□□ 0.84
PDE6CP51160 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.29■□□□□ 0.84
PDE6CP51160 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6CP51160 KRT8P11-201ENST00000409686 1436 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms