Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.79■□□□□ 0.92
CDK7P50613 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.79■□□□□ 0.92
CDK7P50613 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CDK7P50613 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.79■□□□□ 0.92
CDK7P50613 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.79■□□□□ 0.92
CDK7P50613 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.79■□□□□ 0.92
CDK7P50613 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.79■□□□□ 0.92
CDK7P50613 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 AP002469.2-201ENST00000531724 424 ntBASIC20.79■□□□□ 0.92
CDK7P50613 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.79■□□□□ 0.92
CDK7P50613 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.79■□□□□ 0.92
CDK7P50613 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.79■□□□□ 0.92
CDK7P50613 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.79■□□□□ 0.92
CDK7P50613 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDK7P50613 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK7P50613 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK7P50613 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDK7P50613 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK7P50613 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.78■□□□□ 0.92
CDK7P50613 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.78■□□□□ 0.92
CDK7P50613 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDK7P50613 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.78■□□□□ 0.92
CDK7P50613 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.78■□□□□ 0.92
CDK7P50613 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.78■□□□□ 0.92
CDK7P50613 LINC01711-201ENST00000598340 967 ntBASIC20.78■□□□□ 0.92
CDK7P50613 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDK7P50613 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CDK7P50613 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK7P50613 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CDK7P50613 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK7P50613 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDK7P50613 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.78■□□□□ 0.92
CDK7P50613 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDK7P50613 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.78■□□□□ 0.92
CDK7P50613 GABARAPL3-202ENST00000624044 1851 ntBASIC20.77■□□□□ 0.92
CDK7P50613 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CDK7P50613 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.77■□□□□ 0.92
CDK7P50613 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDK7P50613 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.77■□□□□ 0.92
CDK7P50613 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK7P50613 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.77■□□□□ 0.92
CDK7P50613 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK7P50613 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDK7P50613 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDK7P50613 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.77■□□□□ 0.92
CDK7P50613 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK7P50613 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.77■□□□□ 0.92
CDK7P50613 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDK7P50613 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.77■□□□□ 0.92
CDK7P50613 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.77■□□□□ 0.92
CDK7P50613 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK7P50613 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK7P50613 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK7P50613 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDK7P50613 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.77■□□□□ 0.92
CDK7P50613 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDK7P50613 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDK7P50613 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDK7P50613 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CDK7P50613 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CDK7P50613 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.77■□□□□ 0.91
CDK7P50613 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDK7P50613 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CDK7P50613 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDK7P50613 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.76■□□□□ 0.91
CDK7P50613 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK7P50613 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDK7P50613 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK7P50613 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDK7P50613 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDK7P50613 Z83836.1-201ENST00000624605 1642 ntBASIC20.76■□□□□ 0.91
CDK7P50613 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDK7P50613 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK7P50613 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK7P50613 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.76■□□□□ 0.91
CDK7P50613 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK7P50613 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK7P50613 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CDK7P50613 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CDK7P50613 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.76■□□□□ 0.91
CDK7P50613 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.75■□□□□ 0.91
CDK7P50613 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDK7P50613 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK7P50613 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CDK7P50613 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK7P50613 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDK7P50613 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms