Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.81■□□□□ 0.76
TUBP50607 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBP50607 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBP50607 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.81■□□□□ 0.76
TUBP50607 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBP50607 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBP50607 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TUBP50607 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBP50607 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.81■□□□□ 0.76
TUBP50607 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.81■□□□□ 0.76
TUBP50607 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
TUBP50607 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBP50607 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.81■□□□□ 0.76
TUBP50607 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBP50607 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBP50607 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TUBP50607 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.81■□□□□ 0.76
TUBP50607 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBP50607 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.81■□□□□ 0.76
TUBP50607 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBP50607 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBP50607 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBP50607 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.81■□□□□ 0.76
TUBP50607 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBP50607 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBP50607 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBP50607 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TUBP50607 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TUBP50607 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.8■□□□□ 0.76
TUBP50607 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBP50607 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TUBP50607 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBP50607 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TUBP50607 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TUBP50607 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBP50607 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBP50607 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBP50607 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBP50607 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.8■□□□□ 0.76
TUBP50607 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.8■□□□□ 0.76
TUBP50607 AL445228.2-201ENST00000605589 952 ntBASIC19.8■□□□□ 0.76
TUBP50607 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TUBP50607 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.8■□□□□ 0.76
TUBP50607 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TUBP50607 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBP50607 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBP50607 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TUBP50607 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TUBP50607 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBP50607 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.79■□□□□ 0.76
TUBP50607 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TUBP50607 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBP50607 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBP50607 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBP50607 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.79■□□□□ 0.76
TUBP50607 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBP50607 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBP50607 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.79■□□□□ 0.76
TUBP50607 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.79■□□□□ 0.76
TUBP50607 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.79■□□□□ 0.76
TUBP50607 AC117947.1-201ENST00000427448 529 ntBASIC19.79■□□□□ 0.76
TUBP50607 COX11P1-201ENST00000489116 835 ntBASIC19.79■□□□□ 0.76
TUBP50607 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TUBP50607 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.79■□□□□ 0.76
TUBP50607 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBP50607 AL031432.5-201ENST00000641059 760 ntBASIC19.79■□□□□ 0.76
TUBP50607 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBP50607 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBP50607 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
TUBP50607 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBP50607 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBP50607 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBP50607 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.79■□□□□ 0.76
TUBP50607 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
TUBP50607 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 AC005332.7-201ENST00000614046 2005 ntBASIC19.78■□□□□ 0.76
TUBP50607 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TUBP50607 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 AK4P3-201ENST00000418260 669 ntBASIC19.78■□□□□ 0.76
TUBP50607 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 KRT18P35-201ENST00000510488 1269 ntBASIC19.78■□□□□ 0.76
TUBP50607 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.78■□□□□ 0.76
TUBP50607 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.78■□□□□ 0.76
TUBP50607 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TUBP50607 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
TUBP50607 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBP50607 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.78■□□□□ 0.76
TUBP50607 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBP50607 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBP50607 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms