Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CBX5P45973 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX5P45973 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CBX5P45973 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CBX5P45973 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX5P45973 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 MIR638-201ENST00000385237 100 ntBASIC16.2■□□□□ 0.18
CBX5P45973 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX5P45973 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX5P45973 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CBX5P45973 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX5P45973 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX5P45973 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.2■□□□□ 0.18
CBX5P45973 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.2■□□□□ 0.18
CBX5P45973 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CBX5P45973 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CBX5P45973 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 FEM1AP3-201ENST00000403722 1741 ntBASIC16.19■□□□□ 0.18
CBX5P45973 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.19■□□□□ 0.18
CBX5P45973 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 SDHAP1-207ENST00000440850 2000 ntBASIC16.19■□□□□ 0.18
CBX5P45973 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.19■□□□□ 0.18
CBX5P45973 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CBX5P45973 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CBX5P45973 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.19■□□□□ 0.18
CBX5P45973 AL512625.2-201ENST00000417533 625 ntBASIC16.19■□□□□ 0.18
CBX5P45973 AC073210.2-201ENST00000430369 194 ntBASIC16.19■□□□□ 0.18
CBX5P45973 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX5P45973 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
CBX5P45973 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CBX5P45973 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX5P45973 AC231657.2-201ENST00000624556 255 ntBASIC16.19■□□□□ 0.18
CBX5P45973 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX5P45973 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.19■□□□□ 0.18
CBX5P45973 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.19■□□□□ 0.18
CBX5P45973 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX5P45973 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.19■□□□□ 0.18
CBX5P45973 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CBX5P45973 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CBX5P45973 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CBX5P45973 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.19■□□□□ 0.18
CBX5P45973 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CBX5P45973 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CBX5P45973 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CBX5P45973 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.18■□□□□ 0.18
CBX5P45973 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CBX5P45973 NOC2LP2-201ENST00000407594 1944 ntBASIC16.18■□□□□ 0.18
CBX5P45973 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 AC009053.2-201ENST00000563701 2365 ntBASIC16.18■□□□□ 0.18
CBX5P45973 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 AC016769.1-201ENST00000409132 1010 ntBASIC16.18■□□□□ 0.18
CBX5P45973 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 BID-214ENST00000617586 542 ntTSL 5 BASIC16.18■□□□□ 0.18
CBX5P45973 AC083906.6-201ENST00000641366 219 ntBASIC16.18■□□□□ 0.18
CBX5P45973 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CBX5P45973 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CBX5P45973 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CBX5P45973 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CBX5P45973 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CBX5P45973 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms