Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CLCN1P35523 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.4■■□□□ 1.02
CLCN1P35523 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN1P35523 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.4■■□□□ 1.02
CLCN1P35523 LSM12P1-201ENST00000411836 588 ntBASIC21.4■■□□□ 1.02
CLCN1P35523 AL121832.2-201ENST00000610979 668 ntBASIC21.4■■□□□ 1.02
CLCN1P35523 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC21.4■■□□□ 1.02
CLCN1P35523 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN1P35523 TEX21P-204ENST00000641479 1693 ntBASIC21.4■■□□□ 1.02
CLCN1P35523 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN1P35523 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN1P35523 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
CLCN1P35523 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC21.4■■□□□ 1.02
CLCN1P35523 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN1P35523 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLCN1P35523 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLCN1P35523 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLCN1P35523 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CLCN1P35523 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CLCN1P35523 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.39■■□□□ 1.02
CLCN1P35523 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLCN1P35523 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CLCN1P35523 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CLCN1P35523 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN1P35523 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CLCN1P35523 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CLCN1P35523 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.39■■□□□ 1.01
CLCN1P35523 NCF1B-203ENST00000435988 1254 ntBASIC21.39■■□□□ 1.01
CLCN1P35523 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.39■■□□□ 1.01
CLCN1P35523 GUSBP6-202ENST00000438529 1198 ntBASIC21.39■■□□□ 1.01
CLCN1P35523 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCN1P35523 AC006970.2-201ENST00000450065 779 ntBASIC21.39■■□□□ 1.01
CLCN1P35523 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN1P35523 AL031963.3-201ENST00000606441 850 ntBASIC21.39■■□□□ 1.01
CLCN1P35523 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN1P35523 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.39■■□□□ 1.01
CLCN1P35523 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.39■■□□□ 1.01
CLCN1P35523 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN1P35523 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN1P35523 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN1P35523 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN1P35523 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLCN1P35523 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
CLCN1P35523 NKILA-202ENST00000614771 2598 ntBASIC21.39■■□□□ 1.01
CLCN1P35523 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CLCN1P35523 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CLCN1P35523 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
CLCN1P35523 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CLCN1P35523 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CLCN1P35523 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 MIPEPP3-201ENST00000412105 444 ntBASIC21.38■■□□□ 1.01
CLCN1P35523 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.38■■□□□ 1.01
CLCN1P35523 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CLCN1P35523 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CLCN1P35523 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.38■■□□□ 1.01
CLCN1P35523 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.38■■□□□ 1.01
CLCN1P35523 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CLCN1P35523 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLCN1P35523 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.37■■□□□ 1.01
CLCN1P35523 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 AC011676.5-201ENST00000624864 2660 ntBASIC21.37■■□□□ 1.01
CLCN1P35523 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 AL162741.1-201ENST00000565563 1558 ntBASIC21.37■■□□□ 1.01
CLCN1P35523 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CLCN1P35523 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.37■■□□□ 1.01
CLCN1P35523 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.37■■□□□ 1.01
CLCN1P35523 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CLCN1P35523 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.37■■□□□ 1.01
CLCN1P35523 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.37■■□□□ 1.01
CLCN1P35523 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.37■■□□□ 1.01
CLCN1P35523 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLCN1P35523 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms