Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPN7P35236 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN7P35236 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
PTPN7P35236 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN7P35236 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN7P35236 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN7P35236 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
PTPN7P35236 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PTPN7P35236 AC138932.1-201ENST00000534164 6830 ntBASIC19.47■□□□□ 0.71
PTPN7P35236 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN7P35236 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.47■□□□□ 0.71
PTPN7P35236 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PTPN7P35236 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPN7P35236 MYC-208ENST00000641036 567 ntBASIC19.47■□□□□ 0.71
PTPN7P35236 KRT8P45-201ENST00000414328 1447 ntBASIC19.47■□□□□ 0.71
PTPN7P35236 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN7P35236 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPN7P35236 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PTPN7P35236 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPN7P35236 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN7P35236 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PTPN7P35236 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPN7P35236 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPN7P35236 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PTPN7P35236 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN7P35236 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PTPN7P35236 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PTPN7P35236 CR392000.1-201ENST00000624770 1228 ntBASIC19.46■□□□□ 0.71
PTPN7P35236 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN7P35236 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PTPN7P35236 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PTPN7P35236 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN7P35236 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPN7P35236 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPN7P35236 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPN7P35236 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN7P35236 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPN7P35236 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN7P35236 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN7P35236 AC112777.1-201ENST00000540175 1423 ntBASIC19.45■□□□□ 0.7
PTPN7P35236 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN7P35236 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PTPN7P35236 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN7P35236 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN7P35236 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
PTPN7P35236 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PTPN7P35236 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN7P35236 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN7P35236 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN7P35236 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPN7P35236 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.45■□□□□ 0.7
PTPN7P35236 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN7P35236 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN7P35236 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN7P35236 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTPN7P35236 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPN7P35236 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTPN7P35236 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN7P35236 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTPN7P35236 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTPN7P35236 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PTPN7P35236 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPN7P35236 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPN7P35236 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN7P35236 AL499627.1-201ENST00000569373 2188 ntBASIC19.44■□□□□ 0.7
PTPN7P35236 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPN7P35236 AL357033.4-201ENST00000617703 1807 ntBASIC19.44■□□□□ 0.7
PTPN7P35236 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPN7P35236 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN7P35236 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN7P35236 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN7P35236 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN7P35236 FAM207BP-201ENST00000447172 505 ntBASIC19.44■□□□□ 0.7
PTPN7P35236 B3GAT3P1-201ENST00000471720 806 ntBASIC19.44■□□□□ 0.7
PTPN7P35236 AC011506.1-201ENST00000474329 610 ntBASIC19.44■□□□□ 0.7
PTPN7P35236 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN7P35236 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PTPN7P35236 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN7P35236 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN7P35236 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN7P35236 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN7P35236 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPN7P35236 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPN7P35236 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms