Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA3P32297 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.86■□□□□ 0.77
CHRNA3P32297 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA3P32297 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA3P32297 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.85■□□□□ 0.77
CHRNA3P32297 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.85■□□□□ 0.77
CHRNA3P32297 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHRNA3P32297 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CHRNA3P32297 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHRNA3P32297 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CHRNA3P32297 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 FAM197Y1-201ENST00000421178 764 ntBASIC19.85■□□□□ 0.77
CHRNA3P32297 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA3P32297 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CHRNA3P32297 KRT18P16-201ENST00000510337 1294 ntBASIC19.85■□□□□ 0.77
CHRNA3P32297 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA3P32297 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.85■□□□□ 0.77
CHRNA3P32297 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHRNA3P32297 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA3P32297 AL354751.1-201ENST00000412768 1863 ntBASIC19.85■□□□□ 0.77
CHRNA3P32297 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA3P32297 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHRNA3P32297 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.85■□□□□ 0.77
CHRNA3P32297 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA3P32297 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.85■□□□□ 0.77
CHRNA3P32297 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CHRNA3P32297 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA3P32297 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA3P32297 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA3P32297 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA3P32297 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA3P32297 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHRNA3P32297 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA3P32297 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA3P32297 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA3P32297 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA3P32297 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHRNA3P32297 TUBB8P6-201ENST00000436895 1288 ntBASIC19.84■□□□□ 0.77
CHRNA3P32297 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA3P32297 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.84■□□□□ 0.77
CHRNA3P32297 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA3P32297 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA3P32297 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA3P32297 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.84■□□□□ 0.77
CHRNA3P32297 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.84■□□□□ 0.77
CHRNA3P32297 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA3P32297 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA3P32297 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA3P32297 AC083906.6-201ENST00000641366 219 ntBASIC19.84■□□□□ 0.77
CHRNA3P32297 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CHRNA3P32297 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA3P32297 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA3P32297 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA3P32297 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHRNA3P32297 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.84■□□□□ 0.77
CHRNA3P32297 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA3P32297 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA3P32297 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA3P32297 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA3P32297 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA3P32297 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.84■□□□□ 0.77
CHRNA3P32297 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.83■□□□□ 0.77
CHRNA3P32297 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA3P32297 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHRNA3P32297 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
CHRNA3P32297 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.77
CHRNA3P32297 ANO7L1-203ENST00000602586 1720 ntBASIC19.83■□□□□ 0.77
CHRNA3P32297 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CHRNA3P32297 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA3P32297 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.83■□□□□ 0.77
CHRNA3P32297 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA3P32297 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.83■□□□□ 0.77
CHRNA3P32297 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA3P32297 AC026471.5-201ENST00000615068 467 ntBASIC19.83■□□□□ 0.77
CHRNA3P32297 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA3P32297 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.83■□□□□ 0.76
CHRNA3P32297 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA3P32297 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.83■□□□□ 0.76
CHRNA3P32297 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA3P32297 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA3P32297 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRNA3P32297 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CHRNA3P32297 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CHRNA3P32297 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA3P32297 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRNA3P32297 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms