Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
SHC1P29353 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.26■□□□□ 0.35
SHC1P29353 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 AC005332.8-201ENST00000622750 2735 ntBASIC17.26■□□□□ 0.35
SHC1P29353 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC1P29353 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.25■□□□□ 0.35
SHC1P29353 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC1P29353 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC1P29353 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.25■□□□□ 0.35
SHC1P29353 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC1P29353 KRT8P11-201ENST00000409686 1436 ntBASIC17.25■□□□□ 0.35
SHC1P29353 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.25■□□□□ 0.35
SHC1P29353 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC1P29353 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.25■□□□□ 0.35
SHC1P29353 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.25■□□□□ 0.35
SHC1P29353 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.25■□□□□ 0.35
SHC1P29353 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SHC1P29353 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SHC1P29353 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SHC1P29353 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.25■□□□□ 0.35
SHC1P29353 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHC1P29353 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SHC1P29353 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.24■□□□□ 0.35
SHC1P29353 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SHC1P29353 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC1P29353 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SHC1P29353 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.24■□□□□ 0.35
SHC1P29353 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC1P29353 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SHC1P29353 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC1P29353 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SHC1P29353 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC1P29353 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.24■□□□□ 0.35
SHC1P29353 AL390955.1-201ENST00000428694 934 ntBASIC17.24■□□□□ 0.35
SHC1P29353 FAM207BP-201ENST00000447172 505 ntBASIC17.24■□□□□ 0.35
SHC1P29353 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.24■□□□□ 0.35
SHC1P29353 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.24■□□□□ 0.35
SHC1P29353 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC1P29353 AP000692.2-201ENST00000608391 879 ntBASIC17.24■□□□□ 0.35
SHC1P29353 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.24■□□□□ 0.35
SHC1P29353 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.24■□□□□ 0.35
SHC1P29353 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC1P29353 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.24■□□□□ 0.35
SHC1P29353 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SHC1P29353 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SHC1P29353 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SHC1P29353 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.23■□□□□ 0.35
SHC1P29353 AC009113.1-201ENST00000570267 2443 ntBASIC17.23■□□□□ 0.35
SHC1P29353 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.23■□□□□ 0.35
SHC1P29353 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.23■□□□□ 0.35
SHC1P29353 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.23■□□□□ 0.35
SHC1P29353 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SHC1P29353 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SHC1P29353 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC1P29353 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.23■□□□□ 0.35
SHC1P29353 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC1P29353 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC1P29353 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.23■□□□□ 0.35
SHC1P29353 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SHC1P29353 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SHC1P29353 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC1P29353 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC1P29353 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.23■□□□□ 0.35
SHC1P29353 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.23■□□□□ 0.35
SHC1P29353 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC1P29353 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.23■□□□□ 0.35
SHC1P29353 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SHC1P29353 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.23■□□□□ 0.35
SHC1P29353 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC1P29353 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC1P29353 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC1P29353 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC1P29353 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC1P29353 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SHC1P29353 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SHC1P29353 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SHC1P29353 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SHC1P29353 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SHC1P29353 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms