Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX1P22670 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX1P22670 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFX1P22670 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.49■□□□□ 0.87
RFX1P22670 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFX1P22670 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX1P22670 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX1P22670 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX1P22670 KSR1P1-201ENST00000446298 240 ntBASIC20.49■□□□□ 0.87
RFX1P22670 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.49■□□□□ 0.87
RFX1P22670 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX1P22670 LINC01238-205ENST00000567549 1107 ntBASIC20.49■□□□□ 0.87
RFX1P22670 AC026271.3-201ENST00000571884 352 ntBASIC20.49■□□□□ 0.87
RFX1P22670 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFX1P22670 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX1P22670 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RFX1P22670 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.49■□□□□ 0.87
RFX1P22670 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RFX1P22670 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RFX1P22670 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX1P22670 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.48■□□□□ 0.87
RFX1P22670 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RFX1P22670 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
RFX1P22670 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RFX1P22670 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.48■□□□□ 0.87
RFX1P22670 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX1P22670 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX1P22670 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.48■□□□□ 0.87
RFX1P22670 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.48■□□□□ 0.87
RFX1P22670 UPK3BP1-201ENST00000428678 509 ntBASIC20.48■□□□□ 0.87
RFX1P22670 AC004980.1-204ENST00000429707 299 ntBASIC20.48■□□□□ 0.87
RFX1P22670 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RFX1P22670 AC104076.2-201ENST00000448912 469 ntBASIC20.48■□□□□ 0.87
RFX1P22670 PRSS44-201ENST00000515154 1146 ntBASIC20.48■□□□□ 0.87
RFX1P22670 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.48■□□□□ 0.87
RFX1P22670 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.48■□□□□ 0.87
RFX1P22670 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.48■□□□□ 0.87
RFX1P22670 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
RFX1P22670 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RFX1P22670 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX1P22670 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX1P22670 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX1P22670 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX1P22670 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX1P22670 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX1P22670 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RFX1P22670 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.47■□□□□ 0.87
RFX1P22670 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
RFX1P22670 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.47■□□□□ 0.87
RFX1P22670 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.47■□□□□ 0.87
RFX1P22670 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.47■□□□□ 0.87
RFX1P22670 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.47■□□□□ 0.87
RFX1P22670 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.47■□□□□ 0.87
RFX1P22670 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.47■□□□□ 0.87
RFX1P22670 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RFX1P22670 AL512353.2-201ENST00000448759 1962 ntBASIC20.46■□□□□ 0.87
RFX1P22670 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFX1P22670 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFX1P22670 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RFX1P22670 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFX1P22670 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.46■□□□□ 0.87
RFX1P22670 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFX1P22670 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFX1P22670 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.46■□□□□ 0.87
RFX1P22670 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.46■□□□□ 0.87
RFX1P22670 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.46■□□□□ 0.87
RFX1P22670 WWOX-216ENST00000569818 525 ntBASIC20.46■□□□□ 0.87
RFX1P22670 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFX1P22670 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RFX1P22670 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.46■□□□□ 0.87
RFX1P22670 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.46■□□□□ 0.87
RFX1P22670 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.46■□□□□ 0.87
RFX1P22670 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.46■□□□□ 0.87
RFX1P22670 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFX1P22670 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFX1P22670 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.46■□□□□ 0.87
RFX1P22670 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RFX1P22670 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.46■□□□□ 0.87
RFX1P22670 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RFX1P22670 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RFX1P22670 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFX1P22670 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RFX1P22670 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFX1P22670 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RFX1P22670 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.45■□□□□ 0.86
RFX1P22670 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms