Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.15■□□□□ 0.66
NFKB1P19838 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
NFKB1P19838 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.15■□□□□ 0.66
NFKB1P19838 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.15■□□□□ 0.66
NFKB1P19838 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.15■□□□□ 0.66
NFKB1P19838 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.15■□□□□ 0.66
NFKB1P19838 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFKB1P19838 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NFKB1P19838 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NFKB1P19838 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
NFKB1P19838 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NFKB1P19838 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.14■□□□□ 0.66
NFKB1P19838 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
NFKB1P19838 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
NFKB1P19838 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NFKB1P19838 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.14■□□□□ 0.66
NFKB1P19838 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.14■□□□□ 0.66
NFKB1P19838 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFKB1P19838 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NFKB1P19838 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.14■□□□□ 0.65
NFKB1P19838 CRYGFP-201ENST00000418459 633 ntBASIC19.14■□□□□ 0.65
NFKB1P19838 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.14■□□□□ 0.65
NFKB1P19838 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.14■□□□□ 0.65
NFKB1P19838 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.14■□□□□ 0.65
NFKB1P19838 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NFKB1P19838 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFKB1P19838 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.14■□□□□ 0.65
NFKB1P19838 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.14■□□□□ 0.65
NFKB1P19838 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NFKB1P19838 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.14■□□□□ 0.65
NFKB1P19838 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFKB1P19838 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFKB1P19838 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NFKB1P19838 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NFKB1P19838 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.14■□□□□ 0.65
NFKB1P19838 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.14■□□□□ 0.65
NFKB1P19838 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.14■□□□□ 0.65
NFKB1P19838 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.13■□□□□ 0.65
NFKB1P19838 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
NFKB1P19838 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 RBM17P1-201ENST00000453646 1190 ntBASIC19.13■□□□□ 0.65
NFKB1P19838 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 MIR4785-201ENST00000585005 73 ntBASIC19.13■□□□□ 0.65
NFKB1P19838 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
NFKB1P19838 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 RCC2P3-201ENST00000418112 1537 ntBASIC19.13■□□□□ 0.65
NFKB1P19838 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.13■□□□□ 0.65
NFKB1P19838 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
NFKB1P19838 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NFKB1P19838 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.13■□□□□ 0.65
NFKB1P19838 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NFKB1P19838 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.12■□□□□ 0.65
NFKB1P19838 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
NFKB1P19838 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
NFKB1P19838 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.12■□□□□ 0.65
NFKB1P19838 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKB1P19838 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.12■□□□□ 0.65
NFKB1P19838 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFKB1P19838 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKB1P19838 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.12■□□□□ 0.65
NFKB1P19838 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NFKB1P19838 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.12■□□□□ 0.65
NFKB1P19838 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKB1P19838 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKB1P19838 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
NFKB1P19838 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFKB1P19838 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.12■□□□□ 0.65
NFKB1P19838 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
NFKB1P19838 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.12■□□□□ 0.65
NFKB1P19838 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.12■□□□□ 0.65
NFKB1P19838 AC008622.2-201ENST00000617006 1229 ntBASIC19.12■□□□□ 0.65
NFKB1P19838 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKB1P19838 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKB1P19838 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NFKB1P19838 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKB1P19838 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
NFKB1P19838 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms