Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.11■□□□□ 0.33
CD53P19397 NUDT16P1-203ENST00000513809 620 ntBASIC17.11■□□□□ 0.33
CD53P19397 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.11■□□□□ 0.33
CD53P19397 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
CD53P19397 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD53P19397 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CD53P19397 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD53P19397 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CD53P19397 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CD53P19397 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CD53P19397 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD53P19397 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CD53P19397 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD53P19397 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD53P19397 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD53P19397 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.1■□□□□ 0.33
CD53P19397 AC124283.5-201ENST00000624661 1809 ntBASIC17.1■□□□□ 0.33
CD53P19397 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CD53P19397 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CD53P19397 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 UNC93B2-201ENST00000285383 730 ntBASIC17.1■□□□□ 0.33
CD53P19397 AC005521.1-201ENST00000393351 872 ntBASIC17.1■□□□□ 0.33
CD53P19397 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CD53P19397 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CD53P19397 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.1■□□□□ 0.33
CD53P19397 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.1■□□□□ 0.33
CD53P19397 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.1■□□□□ 0.33
CD53P19397 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.1■□□□□ 0.33
CD53P19397 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.1■□□□□ 0.33
CD53P19397 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CD53P19397 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 KRT8P9-201ENST00000558927 1449 ntBASIC17.1■□□□□ 0.33
CD53P19397 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.1■□□□□ 0.33
CD53P19397 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD53P19397 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CD53P19397 AL354751.1-201ENST00000412768 1863 ntBASIC17.1■□□□□ 0.33
CD53P19397 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.09■□□□□ 0.33
CD53P19397 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.09■□□□□ 0.33
CD53P19397 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CD53P19397 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.09■□□□□ 0.33
CD53P19397 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.09■□□□□ 0.33
CD53P19397 AP000525.1-201ENST00000608286 694 ntBASIC17.09■□□□□ 0.33
CD53P19397 REXO1L10P-201ENST00000615707 1290 ntBASIC17.09■□□□□ 0.33
CD53P19397 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 ZNF815P-204ENST00000434898 1737 ntBASIC17.09■□□□□ 0.33
CD53P19397 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.09■□□□□ 0.33
CD53P19397 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.09■□□□□ 0.33
CD53P19397 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CD53P19397 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.09■□□□□ 0.33
CD53P19397 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD53P19397 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD53P19397 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD53P19397 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CD53P19397 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CD53P19397 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
CD53P19397 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD53P19397 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.08■□□□□ 0.33
CD53P19397 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.08■□□□□ 0.33
CD53P19397 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CD53P19397 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CD53P19397 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.08■□□□□ 0.32
CD53P19397 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CD53P19397 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CD53P19397 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.08■□□□□ 0.32
CD53P19397 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CD53P19397 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.08■□□□□ 0.32
CD53P19397 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CD53P19397 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.08■□□□□ 0.32
CD53P19397 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CD53P19397 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.08■□□□□ 0.32
CD53P19397 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.08■□□□□ 0.32
CD53P19397 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.08■□□□□ 0.32
CD53P19397 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.08■□□□□ 0.32
CD53P19397 AC004264.1-201ENST00000608354 794 ntBASIC17.08■□□□□ 0.32
CD53P19397 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.08■□□□□ 0.32
CD53P19397 AL121906.2-201ENST00000621597 723 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms